Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1211 86.0 5e-12 >seq1211 Length=11859842 Score = 86.0 bits (94), Expect = 5e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 105086 GCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCCGGCGA 105145 |||||||||||||||||| || ||||| || || | || |||||||| || ||||| | Sbjct 7148407 GCACGGCTTTCACGTTCATGAATTCGGTGACACAACAAATGGCTGCACCTCAGCCGGTGC 7148466 Query 105146 GCACTTCAA-CCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAAAGGCACGTCG 105204 ||||| || ||| ||| || |||| || || ||||| || || || || | || || | Sbjct 7148467 CCACTTTAATCCCCACG-GCAAAAACCATGGTGCTCCTGATGCTGCTGAGCGACATGTTG 7148525 Query 105205 GCGACCTGGGCAATGT 105220 | ||||| || || || Sbjct 7148526 GGGACCTTGGGAACGT 7148541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398870883784513