Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq1211 86.0 5e-12
>seq1211
Length=11859842
Score = 86.0 bits (94), Expect = 5e-12
Identities = 102/136 (75%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 105086 GCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCCGGCGA 105145
|||||||||||||||||| || ||||| || || | || |||||||| || ||||| |
Sbjct 7148407 GCACGGCTTTCACGTTCATGAATTCGGTGACACAACAAATGGCTGCACCTCAGCCGGTGC 7148466
Query 105146 GCACTTCAA-CCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAAAGGCACGTCG 105204
||||| || ||| ||| || |||| || || ||||| || || || || | || || |
Sbjct 7148467 CCACTTTAATCCCCACG-GCAAAAACCATGGTGCTCCTGATGCTGCTGAGCGACATGTTG 7148525
Query 105205 GCGACCTGGGCAATGT 105220
| ||||| || || ||
Sbjct 7148526 GGGACCTTGGGAACGT 7148541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398870883784513
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |