Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1213 125 1e-23
seq1207 123 5e-23
>seq1213
Length=7437389
Score = 125 bits (138), Expect = 1e-23
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | ||| || || || || ||||| || || || || |
Sbjct 1838096 TACCACCACGAAGACGAAGCACCAGGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGG 1838155
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | |||||||| | || ||||| || || || || | || ||||| || |
Sbjct 1838156 AAAGGGTGCGGCCGTCTTCCAACTGCTTTCCCGCGAATATCAGACGCTGCTGATCCGGTG 1838215
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| || ||||| ||||| || || || ||||| |||| ||| |||| || |
Sbjct 1838216 GAATGCCTTCTTTGTCTTGTATCTTAGCCTTCACGTTTTCTATCGAGTCACTAGGCTCAA 1838275
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || ||||| || || | ||||| || |||||||||||
Sbjct 1838276 CCTCCAAAGTAATAGTCTTTCCAGTGAGTGTCTTCACGAATATCTGCAT 1838324
>seq1207
Length=20116479
Score = 123 bits (136), Expect = 5e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || || || ||||| ||||| || ||||||| | ||
Sbjct 13120229 ACGAAGCACAAGGTGAAGGGTTGACTCCTTCTGAATATTGTAGTCAGATAAGGACCGCCC 13120288
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || | || || |||||||| || || | || |||||||| || || || |||||
Sbjct 13120289 ATCCTCCAACTGCTTGCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATACCCTCCTT 13120348
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| || |||||||| ||||| | |||| ||| || || || | ||||||
Sbjct 13120349 GTCTTGAATCTTAGCCTTTACATTCTCAATAGAATCAGAAGGCTCGACCTCAAGAGTTAT 13120408
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| ||||| || | || || || || ||||||||
Sbjct 13120409 AGTTTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 13120444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981811890552563
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |