Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1213 105 2e-17
seq1207 84.2 5e-11
>seq1213
Length=7437389
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| || || ||||| ||||| || || |||||||| || || | ||||
Sbjct 1838321 CAGATATTCGTGAAGACACTCACTGGAAAGACTATTACTTTGGAGGTTGAGCCTAGTGAC 1838262
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
| | ||| || ||| ||||| ||||| |||||||| ||| ||||| ||
Sbjct 1838261 TCGATAGAAAACGTGAAGGCTAAGATACAAGACAAAGAAGGCATTCCACCGGATCAGCAG 1838202
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||| ||||||||||||||||| || | || | |||| |||||| |
Sbjct 1838201 CGTCTGATATTCGCGGGAAAGCAGTTGGAAGACGGCCGCACCCTTTCCGACTACAACATT 1838142
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || |||||||| ||
Sbjct 1838141 CAGAAGGAGTCGACACTTCACCTGGT 1838116
>seq1207
Length=20116479
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || ||||| || ||| | || || || |||||| | | ||
Sbjct 13120429 AAAACTCTTACTGGCAAAACTATAACTCTTGAGGTCGAGCCTTCTGATTCTATTGAGAAT 13120370
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||||||||| || || || ||| || || || | ||||| ||
Sbjct 13120369 GTAAAGGCTAAGATTCAAGACAAGGAGGGTATTCCACCAGATCAGCAGCGTCTTATTTTT 13120310
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| ||||| || | || | || ||||| | ||||| |||||
Sbjct 13120309 GCTGGCAAGCAGTTGGAGGATGGGCGGTCCTTATCTGACTACAATATTCAGAAGGAGTCA 13120250
Query 206365 ACTCTTCACCTTGT 206378
|| |||||||||||
Sbjct 13120249 ACCCTTCACCTTGT 13120236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181802372089857
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |