Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 111 1e-19
>seq1207
Length=20116479
Score = 111 bits (122), Expect = 1e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| |||||||| ||||||||| | ||| ||| ||| || | || ||||| |
Sbjct 17430772 GACTCCTTTTGAATATTGTAGTCGGATAGGGTTCGCCCATCCTCTAATTGCTTACCAGCG 17430831
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || || || |||||||| ||||| || |||||||| |||||| |||||
Sbjct 17430832 AAGATAAGGCGTTGCTGATCTGGCGGTATACCCTCTTTATCCTGAATTTTCGCTTTCACG 17430891
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | | ||| | ||||| || || | || | ||||| ||||| |||||||||
Sbjct 17430892 TTCTCGATGGAATCACTTGGCTCAACCTCAAGTGTTATAGTTTTTCCAGTAAGAGTTTTT 17430951
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 17430952 ACGAAAATCTGCAT 17430965
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987
||||||| || ||||| |||||||| | || ||| ||| || | ||| || || |
Sbjct 13120249 TTGACTCCTTCTGAATATTGTAGTCAGATAAGGACCGCCCATCCTCCAACTGCTTGCCAG 13120308
Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047
| | || |||||||| |||||||| || || || || || || ||| || || |
Sbjct 13120309 CAAAAATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTAGCCTTTA 13120368
Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107
| || | || ||| | ||||| || || | || | ||||| ||||| |||||||
Sbjct 13120369 CATTCTCAATAGAATCAGAAGGCTCGACCTCAAGAGTTATAGTTTTGCCAGTAAGAGTTT 13120428
Query 132108 TTATGAAAATCTGCATG 132124
| | |||||||||||||
Sbjct 13120429 TCACGAAAATCTGCATG 13120445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476603949552120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |