Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1207 113 4e-20 >seq1207 Length=20116479 Score = 113 bits (124), Expect = 4e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 25169 AACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAA 25228 ||||| ||||| | || |||||||| | || |||||| | || || | || || || Sbjct 17430971 AACAAAATGCAGATTTTCGTAAAAACTCTTACTGGAAAAACTATAACACTTGAGGTTGA- 17430913 Query 25229 GCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCC 25287 ||||| ||| | |||||| | || ||| |||||| |||||||||||||||||||| Sbjct 17430912 GCCAAGTGATTCCATCGAGAACGTGAAAGCGAAAATTCAGGATAAAGAGGGTATACCGCC 17430853 Query 25288 CGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGA 25347 ||||||||| | || || | || || || ||| | || |||| ||| | ||| Sbjct 17430852 AGATCAGCAACGCCTTATCTTCGCTGGTAAGCAATTAGAGGATGGGCGAACCCTATCCGA 17430793 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| || || || |||| | || ||||| | ||||||| Sbjct 17430792 CTACAATATTCAAAAGGAGTCGACACTTCACCTTGTTCTAAGACTACGAGGAGG 17430739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445087629001440