Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq1194 192 2e-44 >seq1194 Length=1075 Score = 192 bits (212), Expect = 2e-44 Identities = 207/274 (76%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 22198 CAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAA 22257 ||||||| |||||||| |||||||||||||||||||| | |||||||||||| ||||| Sbjct 1 CAAACGGTATGATGAAGCTGAATCGCCAGCGGCATCACCTGCTTGTCGCCTTGTATATAA 60 Query 22258 TATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCA 22317 ||||||||||||| || ||| | ||| || || |||| ||||||| ||||||||| | Sbjct 61 TATTTGCCCATGGAGACAACCGCGGCCAACAACTTGTTCATATTGTACACGTTTAACTAC 120 Query 22318 AAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCT 22377 |||||| || | ||| | |||||||||||||| ||| |||||||||||||| ||||| Sbjct 121 AAACTGTTGTATCTCGACTGGGGATTGGCTGAGATTAAACACATATTCTCAATACACCCT 180 Query 22378 TTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGA 22437 | | ||| | || | | || | | ||| || ||| ||||||||| | | Sbjct 181 GTTATCAGATACGTAAGAATCTTACTGCCTCCCGCTCTCTCATGCTGATATATGTGGAAA 240 Query 22438 AACTGCCGGAAATCGTCGTGGTATTCACTCCAGA 22471 ||||| || | |||||| || || ||||| || Sbjct 241 AACTGACGCAGATCGTCCTGTCATGAACTCCTGA 274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184442134426806