Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 149 8e-31
>seq1207
Length=20116479
Score = 149 bits (164), Expect = 8e-31
Identities = 414/629 (66%), Gaps = 7/629 (1%)
Strand=Plus/Minus
Query 111460 CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC 111519
|||||||||||||||||| | |||||| ||||| ||| | ||| | ||||| || ||
Sbjct 7939342 CTCGTACTTTGTGTAGAGCGTTTCAAATTCCTCCCCCCAAGAGTCAGCAAGACCGGG-GC 7939284
Query 111520 CTT-GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGT 111578
|| || || | || | |||| | |||||| | ||||| ||||||||||| || |
Sbjct 7939283 ATTCGTGGGGGTCCATAAAGGTCCATGGGCCACCTGCTTCAACACGCTTCATGAATAGAT 7939224
Query 111579 CTGGAATCCACAG-GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTG 111637
| |||||||| || | | | ||| ||||||| ||||| || ||| |||| |||
Sbjct 7939223 CCGGAATCCAAAGTGCAAGGAAA-AGATCTCGCGCACGAGCTTCCTCGGCACCAGTGTTC 7939165
Query 111638 AGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATA 111697
||||| || | |||| || | ||||| ||||| || || ||||| | || |
Sbjct 7939164 TTCCGTAATTCCACAAACTGCAGCACATCCGGATGCCACGGTTCGAGATAAATGGCAAAG 7939105
Query 111698 GATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGA 111754
| || ||| | || | |||| ||||| || || || ||| || || |||
Sbjct 7939104 GCACCGGGTCGCTTATTGCCCCCCTGATCAACATACCGAGCAGTACTGTTGAAGACCCGA 7939045
Query 111755 AGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCT 111814
||||| || | || ||| | || | ||||| ||||| || || ||
Sbjct 7939044 AGCATCGGCACAAGACCGTTGGACTCGCCATTGGTCCCAGCGATGAAAGTGCCCTTACTC 7938985
Query 111815 CTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 111874
| | | ||| | | | ||||| || ||||| | |||||||| | ||||| |
Sbjct 7938984 CGGATACAATGAACATTGAGACCAATTCCACCAGCACTTTTTGAGATAAGTGCACATTGT 7938925
Query 111875 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 111934
| || || |||| || || | ||| ||| || || | | | | ||||| |||
Sbjct 7938924 TTGAGCGTATCATATATGCCCTCGATACTGTCATCTTTCATCGTAAGCAAAAAGCAGCTG 7938865
Query 111935 GACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA 111994
|||||||| || | || || |||||||| || || || |||| || |||| |||
Sbjct 7938864 GACATCTGAGGGTTAGGCGTCCCAGCATTAAAAAGAGTGGGTGAAGCATGAACCAACCAC 7938805
Query 111995 CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 112054
|| |||||| | ||| ||||| | ||| ||||| || || || |||||||||
Sbjct 7938804 TTTTCGGACATGAGATTGTACGTCTCAATAGCAGCATCAAGATCCTCACCATGGATGCCG 7938745
Query 112055 ATTGCGACCCGCATGAACATGTACTGTGG 112083
|| | ||| ||||| ||||| ||||| ||
Sbjct 7938744 ATAGAGACGCGCATAAACATATACTGGGG 7938716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628022446063200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |