Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1211 91.5 2e-13 >seq1211 Length=11859842 Score = 91.5 bits (100), Expect = 2e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 179956 TTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACT 180015 || || || |||||||| ||||| ||| | ||||| |||||||| |||||||| || Sbjct 3461387 TTACCTCGCAGAGGGAAAACACCATAGCGGTCACGTCCAACCACTCCAAGACCAGCCACG 3461446 Query 180016 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTT-TCCAGATTGTGC 180074 || || | || || ||||| ||||| || | |||||| || || | | | ||| | | Sbjct 3461447 GCCAGAGATTTGGCTGAATCCCCCTCGGTGAGGATGAGGGTGCAGTGCTGCGAATTCTTC 3461506 Query 180075 CGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAATACC 180113 ||||| || | ||| || ||||||||||| ||||| || Sbjct 3461507 -GTCCCCGCGTCGTTAGCATCGTCCAACTTTGGAATCCC 3461544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618425792054520