Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1209 279 7e-70
>seq1209
Length=14622995
Score = 279 bits (308), Expect = 7e-70
Identities = 518/752 (69%), Gaps = 15/752 (2%)
Strand=Plus/Minus
Query 46500 ACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGT 46559
||||||||| || || || ||||| |||| || || || ||||| || |||||| |
Sbjct 7446733 ACAATTCATGCCAATAAGATTGACAGGTAATGCGTCTGTGAGAAATTCGCATTCAATGCT 7446674
Query 46560 GACAGCATCCG--ATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGT 46617
|| || ||| ||| | || || ||| || | | | ||| | | | ||||
Sbjct 7446673 AACCGCCTCCCTCATAATGTC-ATAA-ACTCTTGCTGCCGTAGGTTTGTTGACAATATGT 7446616
Query 46618 TTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTA 46677
||||| || | ||||||||||| || ||||||||||| | || || || |||||
Sbjct 7446615 TTAAAAATAAGGCATGCAAAATCGGTGTGGAGGCCTTCATCCCGGCTGATCAACTCGTTG 7446556
Query 46678 GAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT 46737
|| ||||| || ||||| || |||||||| ||||||||||| |||| || || ||
Sbjct 7446555 CTGAAGGTGAGGCCTGGCATGAGACCACGCTTCTTGAGCCAAAAGATAGAAGCAAATGAA 7446496
Query 46738 CCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCA 46797
||||||||||| | |||||| ||||| |||||||| || || | ||| |||| |||
Sbjct 7446495 CCAGAAAAGAAAACGCCTTCAACAGCAGCGAATGCCACTAGCCGCTCAGCGTATGGGGCT 7446436
Query 46798 T---CATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTT 46854
| ||| ||||||||| |||||||||| || || || ||||| |||| ||
Sbjct 7446435 TTCCTATTTGCAATCCACCTAAGAGCCCAATCGGCTTTCTTAGCAACACATGGCAGCGTC 7446376
Query 46855 TCTATAGCATTAAAGAGAAAGtttttttCATCACT--ATCTTTAACATATGTATCTATTA 46912
| | || ||||| | ||||| ||| |||| ||| |||| || ||||| || |
Sbjct 7446375 TGAACGGCGTTAAACAAAAAGTCGCGTTC--CACTGGATCCTTAATGTAGGTATCAATCA 7446318
Query 46913 AAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATC 46972
|||| |||||||| |||||||||||||| | || | || | ||||||||||| |
Sbjct 7446317 GAAGAGAGTACATTTCGGAATGAATGTTTTCGACGGCGACTTGCATCCCGTAAAAACAAC 7446258
Query 46973 TTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC--AGACAAATTCTCATTCACTAT 47030
|| || | ||| || || || ||||||| |||| || | || ||||| || ||
Sbjct 7446257 GAGCCTCGGGAATTTGGACTTCGTTACAAAA--GTTCAAAGTTAGGTTTTCATTAACGAT 7446200
Query 47031 TCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGT 47090
|||||||| || |||||||| ||||| |||| || |||| ||| | | |
Sbjct 7446199 GCCATCACTGGCTGCAAAAAAAGCCAAAACATAAGATATGAAATGACGTTCGCCATCATT 7446140
Query 47091 CAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGA 47150
|| | ||| ||| ||| || || | | ||| ||||| ||| ||||||| || ||
Sbjct 7446139 AAGGCCTTCCCAATCAGTGAGGTCCTTCGCCAAATCGACTTCCTCAACTGTCCAAAAGGA 7446080
Query 47151 CGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
|| | ||||| || || | | ||| || ||| |||||||||| || | | ||||||
Sbjct 7446079 GGCAACAGCTTTCTTGTAAAACTCCCAGATGTCATGATATTGGATGGGCATCACAACAAA 7446020
Query 47211 TCTATTTGGATTTTTTGCAAGTATAGGTTCCA 47242
||| ||||| |||||| ||||||||
Sbjct 7446019 TCTTCGAGGATTGGGAACAAGTAAAGGTTCCA 7445988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712923554485440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |