Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq4653 95.1 9e-15 >seq4653 Length=38373 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || |||||||| ||||| || |||| || ||| || ||| Sbjct 9076 AGCACCAGGTGCAGCGTAGACTCTTTTTGGATGTTATAATCGGACAATGTGCGACCATCC 9135 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || ||||| ||| | || |||| ||| |||||| || | ||||||||||| Sbjct 9136 TCGAGCTGCTTGCCAGCAAAAATCAGTCGTTGCTGATCCGGTGGGATACCTTCCTTATCT 9195 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | | ||| || |||| | || ||| | || || || Sbjct 9196 TGGATTTTAGCCTTCACGTTTTCAATCGTATCACTTGCTTCCACTTCCAGAGTTATTGTT 9255 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || ||||| ||||| |||||||||||||| Sbjct 9256 TTACCTGTCAACGTTTTGACAAAAATTTGCAT 9287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378946016339835