Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4653 95.1 1e-14 >seq4653 Length=38373 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || ||| ||||||| || | || || | || || || | | Sbjct 9059 ATGCAGATTTTTGTGAAAACTCTGACCGGAAAGACTATTACGTTGGAGGTTGAAGCTAGT 9000 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || |||||||| || | |||| || | || || || ||||| |||||||| || Sbjct 8999 GATACTATCGAAAACGTAA---AAGCTAAGATCCAG-GATAAGGAAGGCATTCCACCAGA 8944 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | ||||| || || || || | ||||||| ||| ||| | ||||| Sbjct 8943 CCAGCAGCGACTCATTTTCGCAGGAAAGCAGCTTGAAGATGGTCGTACTTTATCTGATTA 8884 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||| || || ||||| ||||| ||||| || Sbjct 8883 CAATATCCAGAAGGAATCTACGCTTCATTTGGT 8851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432873379751645