Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq18034 86.0 6e-12 >seq18034 Length=13003 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAG 94545 || ||||||| || | ||| | | ||||||| | |||| |||| |||||| ||| Sbjct 9036 GAAACGGGTAATCCGTTCATGCTTTACAAGGACGCATGCAACCGCAAGAGCAACCAACAG 8977 Query 94546 CACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605 |||| || ||||||| || ||||||||||| || ||||| ||||||| ||| || Sbjct 8976 AACCTGGGAACGATCAAGTGCAGTAATCTGTGCACTGAAATTGTGGAGTATAGTTCACCA 8917 Query 94606 GACGAGATTGCTGTGTGTAACCTGG 94630 || || ||||| || || || |||| Sbjct 8916 GAAGAAATTGCCGTTTGCAATCTGG 8892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494190859284680