Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq20873 91.5 2e-13 >seq20873 Length=10948 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 176879 TGTGTGACAGAGGCATCACGAACATTCTTACACTTC-CCACGAAGAGGGAAGACACCGTA 176937 ||| || |||||| || |||||||| | ||| || || || || || ||||| || || Sbjct 4792 TGTTTGCTAGAGGCTTCGCGAACATT-TAACAATTTGCCCCGCAGTGGAAAGACCCCATA 4734 Query 176938 GTGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTC 176997 | || || ||||| || ||||| || ||||| | | ||| || ||||||||||| Sbjct 4733 ATTGTCACGGCCAACAACTCCAAGACCGGCCACCGCCAAGGATTTGGCCGAATCACCCTC 4674 Query 176998 TGTCACGATGAGTGTACACTTGCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAA 177057 || | ||||| || || | || | | ||| || || ||||| ||||||||||| Sbjct 4673 GGTTAGAATGAGCGTGCAAGTAGATGAGTTTTTCGTGCCTGCGTTGTTAGCATCATCCAA 4614 Query 177058 TTTGGGAATACC 177069 |||||| ||||| Sbjct 4613 TTTGGGTATACC 4602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620074457899760