Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq8541 114 1e-20 >seq8541 Length=25294 Score = 114 bits (126), Expect = 1e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 153277 GGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTAT 153336 |||||||||| ||||| || ||||| | ||||||||||| || | ||||||||| | Sbjct 22241 GGTACACATCATACACACCATATCAGCCAGAGATATCTCAAGGTCGTTTGGAAGCTCTGC 22300 Query 153337 TCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTAT 153396 |||||| |||||| || || | || || || ||||| | | || |||||||| || | Sbjct 22301 TCAATTTCCAAACTCTGGTCGCCGATCTGACTGGATTGAAACTGGCCAACGCATCCCTGT 22360 Query 153397 TAGATGAAGCAACTGCAGCAGCAGAAGC 153424 | ||||||| ||| |||||||| ||||| Sbjct 22361 TGGATGAAGGAACCGCAGCAGCTGAAGC 22388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578589545306720