Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4653 100 2e-16 >seq4653 Length=38373 Score = 100 bits (110), Expect = 2e-16 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 || |||||| | || | |||| ||| ||||||||||| ||||| || | | || | Sbjct 9300 CCGCAAAACAAGATGCAATGTGGATTCCTTCTGAATGTTGTAGTCTGACAACGTGCGACC 9359 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| || | || ||||| || || || | || ||||| ||| |||| | || ||||| Sbjct 9360 ATCCTCTAATTGCTTTCCAGCGAAAATCAAACGCTGCTGATCTGGCGGGATTCCTTCCTT 9419 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTT 34943 || || ||| || || || || |||| || | ||| ||||| |||| ||| Sbjct 9420 ATCTTGTATTTTCGCCTTCAC--ATTCTCAATCGTGTCGCTGGCTTCAACCTCGAGGGTA 9477 Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||| |||||||||||||| |||||||| Sbjct 9478 ATTGTCTTGCCCGTAAGAGTCTTCACAAAAATCTGCAT 9515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324293015020824