Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq15684 165 7e-35 seq1732 154 1e-31 seq45654 141 7e-28 seq8654 140 3e-27 seq24610 122 7e-22 seq13344 109 4e-18 seq4653 107 2e-17 >seq15684 Length=14988 Score = 165 bits (182), Expect = 7e-35 Identities = 367/544 (67%), Gaps = 10/544 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | ||||| || || |||||||| |||| ||| |||| ||||| || Sbjct 2321 GGTATCGATCTTGGAACAACCTACTCCTGTGTTGGGGTTTTCCAACATGGAAAAGTAGAG 2380 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||| || |||||||| ||| | || || ||| |||||| | ||||| || || Sbjct 2381 ATCATTGCGAACGATCAAGGAAACCGCACAACGCCAAGTTATGTGGCATTCACCGACACC 2440 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAA---GCCACTGGTAATCCTACCAATACT 550174 |||| | |||| ||||||||||| | ||| |||| || || || ||||| ||| Sbjct 2441 GAACGACTGATTGGCGATGCAGCAAAGAACCAAGTGGCCA-TG--AACCCGACCAACACT 2497 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | || ||||| |||||| | || || || | ||| ||||| | |||| | || Sbjct 2498 GTGTTCGATGCGAAACGTCTGATCGGTCGACGATTTGATGATCCTTCTGTGACCGAGGAC 2557 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATT-GAAGCTAC 550293 || |||||||| ||| |||||||| | ||| | || | ||| | | | Sbjct 2558 CGTAAACATTGGCCGTTCGAAATTGTTTCAGAAGGTGGTATTCCAAAGATTCGTGTCGAG 2617 Query 550294 TCATGAAG-GATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGA 550352 | | | || | | ||| || || | ||| | |||||||| ||||| || |||| Sbjct 2618 TTCCGTGGCGAACAG--AAAACTTTCTCGGCTGAAGAGATTTCATCGATGGTGTTGATGA 2675 Query 550353 AAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTG 550412 | ||||| | | || || | |||| |||| || | |||||||| | |||| Sbjct 2676 AGATGAAGGAGATCGCGTCCGCATACCTTGGCAAAGATGTGAAAGATGCAGTGGTCACTG 2735 Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472 | || || ||||| || ||| ||||||||||| || |||||||| || ||||| | Sbjct 2736 TTCCGGCCTATTTCAACGACAGTCAACGTCAAGCGACAAAAGATGCCGGTGCGATTGCCG 2795 Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532 || | ||||| | || || ||||| || || ||||| ||||| | || || || | | Sbjct 2796 GATTGAATGTGTTGCGCATAATCAACGAGCCGACTGCGGCTGCTATCGCTTACGGTTTGG 2855 Query 550533 ATAA 550536 |||| Sbjct 2856 ATAA 2859 >seq1732 Length=63940 Score = 154 bits (170), Expect = 1e-31 Identities = 367/550 (67%), Gaps = 6/550 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || || |||||| |||| ||||| || ||||| || |||| |||| || || Sbjct 47152 AGCAATTGGCATAGATCTAGGCACCACCTACTCATGTGTGGGAGTTTTCAAAAACGGCAA 47093 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || |||||||| || ||||| || || || ||||||| || ||||| | ||||| Sbjct 47092 GGTGGAAATTATCGCAAATGACCAGGGCAATCGAACTACACCGAGCTATGTGGCATTCAC 47033 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| | || | | |||| || || || | | |||| | || ||||| || || Sbjct 47032 GGACAACGAGCGACTGATTGGAGACGCTGCGAGAAATCAGGTGGCTATGAATCCCACAAA 46973 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 |||| | || || || |||||| | || || | | ||| ||||| | | || | Sbjct 46972 TACTGTGTTCGACGCCAAACGTCTGATCGGTCGTCGCTTTGATGATCCCGCAGTGGCCGA 46913 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG- 550289 ||| || || ||||| ||| | | || |||| |||||||||| | || | | Sbjct 46912 GGATCGAAAACACTGGCCGTTCACAGTGATTGATGTGGCTGGAAAACCAAAAATACAGGT 46853 Query 550290 CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | | | | ||| ||| |||| || ||| | || ||||| ||||| || | Sbjct 46852 CGAAT-ACAAGGGAGAGACAAAATCTTTTTTCCCGGAAGAGATATCATCCATGGTGTTGA 46794 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA--GTTACGGATGCAGTAAT 550407 |||||||| |||||||| || | | ||||| |||| || || ||| || || Sbjct 46793 TGAAAATGCGTGAAACAGCCGAGGCGTATCTTGGT--AGAACGGTAACAGATAGTGTGAT 46736 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || || || || |||||||||||| ||| | ||||| || ||||||||||| || Sbjct 46735 TACCGTGCCGGCTTATTTTAATGACAGTCAAAGACAAGCCACAAAAGATGCTGGCACAAT 46676 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||| | ||||| | | || || || ||||| || |||||||| | || ||||| Sbjct 46675 TGCTGGTTTGAATGTGTTAAGAATCATTAACGAACCAACAGCTGCTGCGATCGCGTATGG 46616 Query 550528 ACTTGATAAA 550537 | |||||| Sbjct 46615 TTTGGATAAA 46606 Score = 149 bits (164), Expect = 5e-30 Identities = 524/806 (65%), Gaps = 22/806 (3%) Strand=Plus/Minus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTA--TCATGGTGTGTTG 551847 || ||| | ||| | || || |||||||| || | | | | || |||| |||| | Sbjct 46497 GGTGATACACATTTGGGCGGTGAAGATTTCGACAGTCGTTTAGTCAGTCATTTTGTGCAG 46438 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCGTCG 551905 || |||||||||||||||||| ||||| || | || | || | | ||||| || Sbjct 46437 --GAATTTAAACGAAAAAACAAAAAAGATCTGTC-AGAT-AACAAACGTTCGCTTCGACG 46382 Query 551906 TCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTAT 551965 |||| | || ||||| ||| ||||||| || | || | | | ||| ||| | | Sbjct 46381 TCTACGGACAGCTTGTGAACGAGCCAAGCGCACACTGAGTGCCAGCGCACAAGCCAATGT 46322 Query 551966 TGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATT 552025 ||| | || ||||| || || ||||| |||| | || | || | | ||| ||| Sbjct 46321 GGAAATTGACTCATTGTTCGAAGGAATCGATTTCTACACCACAATCACCCGTGCCCGATT 46262 Query 552026 TGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAG 552085 ||| || | || | ||||| || ||| ||| | || || || || ||| ||| | Sbjct 46261 TGAGGAATTGTGCGCGGATCTGTTCCGAAGCACACTGGATCCGGTCGAGAAAGCCTTACG 46202 Query 552086 AGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 ||| | || | |||||| || | | || |||||||| ||||| ||||| || || || Sbjct 46201 TGATGCTAAACTGGATAAAACCCAGATTCACGAAATTGTCCTTGTGGGTGGTTCAACTAG 46142 Query 552146 AATTCCTAAAATTCGCGAAATGTTA----AGTTCTTATTTCAATGGTAAAAAATTAAATG 552201 ||||| ||||| | | | |||| || || |||||||| || || | || Sbjct 46141 GATTCCAAAAAT---CCAGAAGTTATTGCAG-GATTTCTTCAATGGAAAGGAACTGAACA 46086 Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 || | ||||| || || || || || || || || ||| |||||||||| ||||| Sbjct 46085 AATCCATCAATCCGGACGAAGCGGTCGCGTACGGCGCAGCAGTTCAAGCAGCGATTCTGA 46026 Query 552262 CTG--GACAAA-CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318 || |||||| | || | | | | ||| ||| | | ||||| ||||| || | Sbjct 46025 GTGGAGACAAATCAGACGTGGTTC-AGGACATACTGT--TACTCGATGTGACTCCGCTGT 45969 Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378 | || || || ||||| | || || | ||||| || ||| | | ||||| |||| Sbjct 45968 CCCTGGGATTGGAAACCGCCGGTGGCGTGATGACCCCACTAATCAAACGGAATACAACTA 45909 Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438 |||| ||| || | | ||| | ||||| || ||||||||| | |||| || Sbjct 45908 TTCCGACAAAACAAACACAAACTTTTACCACGTACTCGGATAATCAACAAGGTGTTTTAA 45849 Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 ||||| | | || || ||| | | || || ||||| ||| | | || | ||| Sbjct 45848 TTCAAGTGTACGAGGGGGAACGCGCGATGACAAAGGATAACAATTTATTGGGAAAATTTG 45789 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | || ||| | || || || || | || || || || || || || || || |||| Sbjct 45788 AACTATCAGGATTCCCACCAGCACCGAGGGGTGTGCCACAGATCGAGGTGACCTTTGATA 45729 Query 552559 TCGATGCCAATGGAATTTTGAATGTG 552584 | ||||| || || || ||||||||| Sbjct 45728 TTGATGCGAACGGGATATTGAATGTG 45703 >seq45654 Length=2674 Score = 141 bits (156), Expect = 7e-28 Identities = 362/544 (67%), Gaps = 13/544 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| || | ||||| || || |||||||| |||| ||| |||| ||||| || Sbjct 1226 GGTATCGACCTTGGAACAACCTACTCCTGTGTTGGGGTTTTCCAACATGGAAAAGTAGAG 1285 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||| || |||||||| ||| | || || ||| || ||| | ||||| || || Sbjct 1286 ATCATTGAGAACGATCAAGGAAACCGCACCACGCCAAGTTTTGTGGCATTCACCGACACC 1345 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAA---GCCACTGGTAATCCTACCAATACT 550174 |||| | |||||||||||||||| | ||| |||| || || || ||||| ||| Sbjct 1346 GAACGACTGATTGGTGATGCAGCAAAGAACCAAGTGGCCA-TG--AACCCGACCAACACT 1402 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | || || || |||||| | || || | | ||| ||||| | |||| | || Sbjct 1403 GTGTTCGACGCGAAACGTCTGATCGGTCAACGATTTGATGATCCTTCTGTGACCGAGGAC 1462 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTAC 550293 || |||||||| ||| |||||||| | ||| | || | ||| ||| | | Sbjct 1463 CGTAAACATTGGCCGTTCGAAATTGTTTCAG---GTGGTATTCCGAAGATTCAAGTCGAG 1519 Query 550294 TCATGAAG-GATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGA 550352 | | | || | | ||| || || | ||| | ||||| || ||| |||| || | Sbjct 1520 TTCCGTGGCGAACAG--AAAACTTTCTCTGCTGAAGAGATTTCTTCGATGATTTTGATTA 1577 Query 550353 AAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTG 550412 | ||||| | | || || | |||| ||| || | || ||||| | |||| Sbjct 1578 AGATGAAGGAGATCGCGTCCGCATACCTTGGCAAAGTTGTGAAAGAGGCAGTGGTCACTG 1637 Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472 | || || ||||| || ||| ||||||||||| || |||||||| || ||||| | Sbjct 1638 TTCCGGCCTATTTCAACGACAGTCAACGTCAAGCGACAAAAGATGCCGGTGCGATTGCCG 1697 Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532 |||| ||||| | || || ||||| || || ||||| ||||| | || || || | | Sbjct 1698 GACTGAATGTGTTGCGCATAATCAACGAGCCGACTGCGGCTGCTATCGCTTACGGTTTGG 1757 Query 550533 ATAA 550536 |||| Sbjct 1758 ATAA 1761 >seq8654 Length=25055 Score = 140 bits (154), Expect = 3e-27 Identities = 387/588 (66%), Gaps = 8/588 (1%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||||| || || || || || || ||||||| || | || || ||||| Sbjct 23941 GGGATTGATTTGGGCACGACCTACTCCTGCGTCGGTGTTTTCCAGCACGGGAAGGTTGAG 24000 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 |||||||||||||| ||||||||| | || || || |||||| |||| ||||| ||| Sbjct 24001 ATTATTGCCAATGACCAAGGTAACCGCACGACACCCAGTTATGTGGCTTTTACGGACACT 24060 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTACCAATACT 550174 |||| | |||||||||| || ||| | |||| ||| || ||||| | ||| || Sbjct 24061 GAACGACTCATTGGTGATGCCGCGAAAAACCAAGTGGCCA-TG--AATCCAAGCAACACC 24117 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | ||||| || || ||| | || ||| | | || | ||| | | || || ||| Sbjct 24118 GTCTTTGACGCGAAGCGTCTCATCGGACGCCGATTCAGTGACCCCTCAGTCACCGCCGAT 24177 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294 ||||| ||| | || || | | | || || || | ||| || Sbjct 24178 CGCAAGCACTGGTCGTTTGAAGTGATCTCCGAGAATGATAAGCCGAAGATTCGAGTGGAG 24237 Query 550295 CATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAA 550354 | |||| | ||| ||| || | ||| | || || || ||| | ||||||||| Sbjct 24238 TACAAAGGTGAGATGAAAACATTCTCGGCTGAAGAGATATCTTCCATGATCTTAATGAAA 24297 Query 550355 ATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTT-ACGGATGCAGTAATAACTGT 550413 ||||| || || | | | ||| |||||| | ||||| || || || ||||| Sbjct 24298 ATGAAGGAAGTTGCTGAGGGATACCTGGGT-AAGAAGGTCACGGACGCTGTGATCACTGT 24356 Query 550414 ACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473 || || || || || || || | ||||| ||||| ||| | || ||| ||||| Sbjct 24357 CCCGGCCTACTTCAACGATAGCCAGAGGCAAGCAACTAAGGATTCCGGTGCTATCGCTGG 24416 Query 550474 ACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGA 550533 ||||| ||||| || || ||||| ||||| ||||||||||| | || |||||| | || Sbjct 24417 TCTTAACGTTCTGCGCATAATCAACGAACCCACTGCTGCTGCCATAGCCTATGGATTGGA 24476 Query 550534 TAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 ||| | || | |||| ||| || || || ||||||| ||||| Sbjct 24477 CAAAAAGGTTGGTGGGGAACGTAACGTGCTTATTTTTGATTTGGGAGG 24524 >seq24610 Length=8903 Score = 122 bits (134), Expect = 7e-22 Identities = 193/277 (70%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 ||||| | ||| | | ||||| | ||||||||||||||| | ||||| || || ||| Sbjct 5041 GATGTAAGTCCATTGACACTTGGAATTGAAACAGTTGGAGGTGTCATGACCAAGCTCATC 5100 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 | | || ||| | | || ||||||||| | |||| || ||| | || ||| Sbjct 5101 CCTCGCAACACTGTTGTACCCACTAAAAAATCGCAGATATTCTCGACGGCAGCTGACAAT 5160 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 ||| | | || ||||| || ||| |||||| ||| | | || || ||||| || Sbjct 5161 CAACCAACCGTAACAATCCAGGTTTATGAAGGTGAACGCTCCATGACCAAGGATAACAAC 5220 Query 552483 CAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542 ||||| | || | || ||||||||||| ||||||||||| || || |||||| Sbjct 5221 TTGCTTGGCAAATTCGACTTGACTGGTATTCCTCCAGCTCCTCGTGGTGTGCCCCAAATT 5280 Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAATTTTGA 552579 ||||| ||||| || || |||| ||| || ||||||| Sbjct 5281 GAAGTCACTTTTGAAATAGATGTCAACGGTATTTTGA 5317 >seq13344 Length=17380 Score = 109 bits (120), Expect = 4e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || |||||||| ||| || || || ||||| || | || |||| Sbjct 11970 AGACGCAGAACGAGATGAAGTGTAGACTCCTTCTGTATGTTGTAGTCCGAGAGCGTTCGA 12029 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || || ||||| || ||||| || | || ||||||||||||||||||||| Sbjct 12030 CCGTCTTCGAGCTGCTTTCCAGCGAAAATTAGACGCTGTTGATCAGGAGGAATTCCTTCT 12089 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 ||||||||||||||| |||||| ||| || || || | | ||| || || || Sbjct 12090 TTATCTTGAATTTTTGCTTTTACATTCTCGATGGTGTCCGAAGGTTCTAC-CTCAAGCGT 12148 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || ||||| | || |||||||| |||||||| Sbjct 12149 GATGGTCTTCCCAGTCAAGGTCTTAACGAAGATTTGCAT 12187 >seq4653 Length=38373 Score = 107 bits (118), Expect = 2e-17 Identities = 158/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || ||||| || ||| ||| || || |||||||||| || || | Sbjct 8614 AGACGGAGCACGAGATGTAGCGTAGATTCCTTCTGTATGTTGTAATCAGAAAGTGTGCGA 8673 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | || || || ||||| || || | ||| ||||| ||||| || |||||| Sbjct 8674 CCATCTTCCAACTGCTTACCAGCAAATATCAGCCGTTGTTGATCTGGAGGGATGCCTTCT 8733 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC---AGTGTGAGTACATTCGAGA 563433 ||||| |||||||| ||| || || || ||||| || | | || ||||||| Sbjct 8734 TTATCCTGAATTTTAGCTTTCACGTTTTCGATGGTATCGCTAGCTTCA--AC-TTCGAGA 8790 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| ||||| ||||| | || || |||||||| ||||| Sbjct 8791 GTAATGGTTTTGCCAGTCAACGTCTTCACGAAAATCTGCAT 8831 Score = 102 bits (112), Expect = 7e-16 Identities = 157/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || || | ||| | |||||| ||| ||| || ||||||||||||| || ||| | Sbjct 8842 AGTCGCAATACCAAATGAAGCGTAGATTCCTTCTGGATATTGTAATCAGATAAAGTACGA 8901 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||| || ||||| || ||||| |||| ||||| || || ||||| ||||| Sbjct 8902 CCATCTTCAAGCTGCTTTCCTGCGAAAATGAGTCGCTGCTGGTCTGGTGGAATGCCTTCC 8961 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAG-TACA--TTCGAGA 563433 ||||| || || || |||||| || || |||||| | || | || || | Sbjct 8962 TTATCCTGGATCTTAGCTTTTACGTTTTCGATAGTATCACT---AGCTTCAACCTCCAAC 9018 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| ||| || || || |||||||| || ||||| ||||| Sbjct 9019 GTAATAGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCAT 9059 Score = 98.7 bits (108), Expect = 8e-15 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 563259 ACGGAGTACAAGATGAAGGGTA--CTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||| || || || || ||| || | ||||| || || ||||| | | || | Sbjct 9072 ACGGAGCACCAGGTGCAGCGTAGACTCTTTTTGG--ATGTTATAATCGGACAATGTGCGA 9129 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || || || || || |||||||| |||| ||||||||| || || || ||||| Sbjct 9130 CCATCCTCGAGCTGCTTGCCAGCAAAAATCAGTCGTTGCTGATCCGGTGGGATACCTTCC 9189 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 |||||||| ||||| || || ||||| |||||| | || | || ||| ||||| Sbjct 9190 TTATCTTGGATTTTAGCCTTCACGTTTTCAATCGTATCACT-TGCTTCCACTTCCAGAGT 9248 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||||||| || | ||||| || ||||||||||| Sbjct 9249 TATTGTTTTACCTGTCAACGTTTTGACAAAAATTTGCAT 9287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4024743542725670