Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq8541 109 6e-19 >seq8541 Length=25294 Score = 109 bits (120), Expect = 6e-19 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922 || || |||||||| ||| ||||||| || || |||||||| || | | ||||| || Sbjct 22388 GCTTCAGCTGCTGCGGTTCCTTCATCCAACAGGGATGCGTTGGCCAGTTTCAATCCAGTC 22329 Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982 || || | || || |||||| |||||| | ||||||||| | || ||||||||||| Sbjct 22328 AGATCGGCGACCAGAGTTTGGAAATTGAGCAGAGCTTCCAAACGACCTTGAGATATCTCT 22269 Query 139983 GCTTGATAGGGAGTGTAAGATGTGTACC 140010 | ||||| || ||||| |||||||||| Sbjct 22268 GGCTGATATGGTGTGTATGATGTGTACC 22241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578375376009160