Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq4653 118 2e-21 >seq4653 Length=38373 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | || ||||| || ||||| | || || ||| || | Sbjct 9058 TGCAGATTTTTGTGAAAACTCTGACCGGAAAGACTATTACGTTGGAGGTTGAAGCTAGTG 8999 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| |||| |||||| ||| || || ||| |||||||||||||| || || | Sbjct 8998 ATACTATCGAAAACGTAAAAGCTAAGATCCAGGATAAGGAAGGCATTCCACCAGACCAGC 8939 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||||| ||||| || || | || ||| | | || ||| | ||||| |||| Sbjct 8938 AGCGACTCATTTTCGCAGGAAAGCAGCTTGAAGATGGTCGTACTTTATCTGATTACAATA 8879 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | || || ||||| || | ||||| ||||| ||| Sbjct 8878 TCCAGAAGGAATCTACGCTTCATTTGGTATTGCGA 8844 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| |||||| | || || ||| || || Sbjct 8830 TGCAGATTTTCGTGAAGACGTTGACTGGCAAAACCATTACTCTCGAAGTTGAAGCTAGCG 8771 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| || ||| |||||| || |||||||||||| || || ||||||| Sbjct 8770 ATACCATCGAAAACGTGAAAGCTAAAATTCAGGATAAAGAAGGCATCCCTCCAGATCAAC 8711 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| ||||| || || || ||| | | || | | ||||| || | Sbjct 8710 AACGGCTGATATTTGCTGGTAAGCAGTTGGAAGATGGTCGCACACTTTCTGATTACAACA 8651 Query 146212 TACAAAAAGAATCGAC 146227 |||| || ||||| || Sbjct 8650 TACAGAAGGAATCTAC 8635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785320455472360