Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2617 102 1e-16 >seq2617 Length=52584 Score = 102 bits (112), Expect = 1e-16 Identities = 97/123 (79%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 146935 TTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTC 146994 ||||| |||| ||||| || |||| |||||||||||| || ||||| || || || ||| Sbjct 24848 TTGAG-TAGATATGCGCATCACCCATGGTGTGCACAAATTCACCCGGTTTGAGTCCAGTC 24906 Query 146995 ACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGG 147054 | || || | ||||||||||||||| || ||||| || | ||| || ||||| ||||| Sbjct 24907 ATATGAGCAATCATGTAGGTGAGCAGTGAATAGCTCGCAACGTTAAACGGGACGCCCAGA 24966 Query 147055 CCC 147057 ||| Sbjct 24967 CCC 24969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582860145031200