Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq20873 98.7 1e-15 >seq20873 Length=10948 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 182673 GAAGCGTCCCGAACATTCTTACA-TTTACCGCGAAGTGGGAACACACCGTAGTGATCACG 182731 || || || |||||||| | ||| ||| || || ||||| || || || || | ||||| Sbjct 4783 GAGGCTTCGCGAACATT-TAACAATTTGCCCCGCAGTGGAAAGACCCCATAATTGTCACG 4725 Query 182732 ACCAACGACAGAGAGACCCGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAAT 182791 ||||| || ||||| || ||||| | || ||| |||||||||||||| || | ||| Sbjct 4724 GCCAACAACTCCAAGACCGGCCACCGCCAAGGATTTGGCCGAATCACCCTCGGTTAGAAT 4665 Query 182792 GAGAGTACACTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAAT 182851 ||| || || | || | | ||| || || ||||| || |||||||| ||||| || Sbjct 4664 GAGCGTGCAAGTAGATGAGTTTTTCGTGCCTGCGTTGTTAGCATCATCCAATTTGGGTAT 4605 Query 182852 ACC 182854 ||| Sbjct 4604 ACC 4602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627356214016800