Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq20873 100 3e-16 >seq20873 Length=10948 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 169316 TGTGTGACAGAGGCATCGCGAACATTCTTACACTTC-CCACGAAGAGGGAAGACACCGTA 169374 ||| || |||||| ||||||||||| | ||| || || || || || ||||| || || Sbjct 4792 TGTTTGCTAGAGGCTTCGCGAACATT-TAACAATTTGCCCCGCAGTGGAAAGACCCCATA 4734 Query 169375 GTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTC 169434 | ||||| ||||| || ||||| || || || | | || ||||| |||||||| Sbjct 4733 ATTGTCACGGCCAACAACTCCAAGACCGGCCACCGCCAAGGATTTGGCCGAATCACCCTC 4674 Query 169435 GGTGACGATGAGCGTACATTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAA 169494 ||| | |||||||| || | || | | ||| || || ||||| ||||||||||| Sbjct 4673 GGTTAGAATGAGCGTGCAAGTAGATGAGTTTTTCGTGCCTGCGTTGTTAGCATCATCCAA 4614 Query 169495 TTTGGGAATACC 169506 |||||| ||||| Sbjct 4613 TTTGGGTATACC 4602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582633189506920