Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq20873 87.8 2e-12 >seq20873 Length=10948 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 118148 TTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGA 118207 |||||| | | ||||| | | ||| || ||||| || | || |||||||||||| Sbjct 4804 TTTTCCATGATTTGTTTGCTAGAGGCTTCGCGAACATTTAACAATTTGCCCCGCAGTGGA 4745 Query 118208 AACACGCCAAACTTGTCACGGCCCACAACGCTCAAG-CCGGCAATAGCAAGGGCCTTCGC 118266 || || ||| | ||||||||||| ||||| | |||| ||||| | || | || || || Sbjct 4744 AAGACCCCATAATTGTCACGGCCAACAACTC-CAAGACCGGCCACCGCCAAGGATTTGGC 4686 Query 118267 CGAGTCACCCTCGGTAATAATAAGAGTGCA 118296 ||| ||||||||||| | ||| || ||||| Sbjct 4685 CGAATCACCCTCGGTTAGAATGAGCGTGCA 4656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546627175063400