Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2038 118 8e-22 >seq2038 Length=246823 Score = 118 bits (130), Expect = 8e-22 Identities = 109/137 (80%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 19066 TTGGG-GTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTT 19124 ||||| || ||||||||||||||| | |||||||| ||||| ||||| | || ||| | Sbjct 141885 TTGGGCGTTCCGTTCAACATTGCTAGCTATGCACTACTTACATACATGATTGCCCATCTG 141826 Query 19125 ACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAAT 19184 || ||||| ||| | || || || | ||||||||||||||||||||||| || | |||| Sbjct 141825 ACGGGACTGAAACCGGGTGAATTTGTGCATACAATGGGGGATGCACATATCTATTCGAAT 141766 Query 19185 CATATAGATGCTTTAAA 19201 ||| ||| ||||| || Sbjct 141765 CATCAAGAGGCTTTGAA 141749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399405851605110