Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq6840 82.4 6e-11 >seq6840 Length=28952 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 19974 ATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGT 20033 || ||| || || ||||| | ||| || ||||||| || || ||||| || ||||||| Sbjct 19595 ATTATTGACCACCGCGTAAACGCAAAACTAAATGTAAGGTTGACTCTTTCTGGATGTTGT 19654 Query 20034 AATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGAT 20093 | || | ||| ||||||||| || ||||| ||| |||| || | || || | Sbjct 19655 AGTCAGATAAAGTACGGCCATCTTCCAACTGCTTGCCAGCAAAAATTAGACGTTGCTGGT 19714 Query 20094 CGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAG 20153 | || | ||||||||||| |||||| |||||| | ||| | ||| | | Sbjct 19715 CTGGAGGAATACCTTCTTTGTCTTGAATTTTGGCTTTCACGTTCTCAATCGTATCACTGG 19774 Query 20154 GTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || | || || ||||||||||| | ||| || || ||||||||||| Sbjct 19775 ACTCTACCTCGAGAGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATTTGCAT 19829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419484117652398