Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq14037 136 3e-27 seq8126 136 3e-27 seq7617 136 3e-27 seq5200 136 3e-27 seq4922 136 3e-27 seq1378 136 3e-27 seq13867 131 1e-25 seq13763 131 1e-25 seq1025 131 1e-25 seq2814 125 5e-24 seq6576 120 2e-22 seq734 118 7e-22 seq15946 114 9e-21 seq5556 113 3e-20 seq7102 109 4e-19 seq926 109 4e-19 seq4407 107 1e-18 seq4037 107 1e-18 seq2553 104 2e-17 seq1875 104 2e-17 seq1326 104 2e-17 seq45 104 2e-17 seq2317 100 2e-16 seq8815 98.7 7e-16 seq6840 98.7 7e-16 seq4514 95.1 8e-15 seq8892 93.3 3e-14 seq6844 89.7 3e-13 seq5962 89.7 3e-13 seq16998 87.8 1e-12 seq13876 86.0 4e-12 seq8355 82.4 5e-11 seq3052 82.4 5e-11 >seq14037 Length=6966 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 3835 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 3894 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3895 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3929 >seq8126 Length=20977 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 16270 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 16211 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 16210 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 16176 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 15816 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 15757 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||| ||||||| Sbjct 15756 TAATCCATTCATGCGCGTCACTAATTACATGACGA 15722 Score = 116 bits (128), Expect = 2e-21 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 1110 TTACTCTCTCTTCAAAGTACTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACT 1051 Query 20004 CGCGGTAATATTTAGCCTT 20022 || | || ||||||||||| Sbjct 1050 CGTGCTAGTATTTAGCCTT 1032 >seq7617 Length=25701 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 14554 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 14613 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 14614 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 14648 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 17245 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 17304 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 17305 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 17339 Score = 116 bits (128), Expect = 2e-21 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 16819 TTACTCTCTCTTCAAAGTACTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACT 16878 Query 20004 CGCGGTAATATTTAGCCTT 20022 || | || ||||||||||| Sbjct 16879 CGTGCTAGTATTTAGCCTT 16897 >seq5200 Length=44790 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 24983 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 25042 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 25043 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 25077 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG-----GGGGTAATCTCGT 25956 |||||||||||||||||||| ||||||||||||||||||||| | | |||||||| Sbjct 25544 AAGCCCGTTCCCTTGGCTGTAGTTTCGCTAGATAGTAGATAGGAACAGTAGGAATCTCGT 25603 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||| |||||||||||||||||||| Sbjct 25604 TAATCCATTCATGCTCGTCACTAATTAGATGACGA 25638 >seq4922 Length=94101 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 1064 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 1005 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1004 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 970 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 6179 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 6120 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 6119 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6085 Score = 122 bits (134), Expect = 6e-23 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956 |||||||||||||||| |||||||| ||||||||||| ||| || |||| ||||||| Sbjct 7436 AAGCCCGTTCCCTTGGATGTGGTTTTGCTAGATAGTATATAAGGACGGTAGGAATCTCGT 7377 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 7376 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 7342 >seq1378 Length=263532 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 251103 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 251044 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 251043 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 251009 >seq13867 Length=13818 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||| ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 5143 AAGCCCGTTCTCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 5084 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5083 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5049 >seq13763 Length=7228 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 7181 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 7122 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||| ||||||| Sbjct 7121 TAATCCATTCATGCGCGTCACTAATTACATGACGA 7087 >seq1025 Length=237809 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 74737 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAAATAGGGACAGTAGGAATCTCGT 74796 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 74797 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 74831 >seq2814 Length=333951 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||| || | ||| | ||| |||||| || ||||||||||||| Sbjct 221375 TACCACCACGAAGTCGCAAAACAAGATGCAAAGTTGACTCCTTCTGGATATTGTAATCAG 221316 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || || || || || |||||||| | |||||||| || | | Sbjct 221315 ACAACGTACGACCATCTTCCAACTGCTTCCCCGCAAATATCAATCGTTGTTGGTCTGGTG 221256 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||| || ||||| ||| || |||||||||| | ||||| | | || | Sbjct 221255 GAATGCCCTCCTTGTCTTGAATCTTCGCTTTCACATTCTCAATCGTATCACTAGCCTCCA 221196 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| ||||| || || ||||| ||||| || ||||| ||||||||||| Sbjct 221195 CTTCCAATGTTATCGTCTTACCAGTCAACGTCTTCACAAATATCTGCAT 221147 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||| || | ||| | ||| |||||| || ||||||||||||| Sbjct 221603 TACCACCACGAAGTCGCAAAACAAGATGCAAAGTTGACTCCTTCTGGATATTGTAATCAG 221544 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || || || || || |||||||| | |||||||| || | | Sbjct 221543 ACAACGTACGACCATCTTCCAACTGCTTCCCCGCAAATATCAATCGTTGTTGGTCTGGTG 221484 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||| || ||||| ||| || |||||||||| | ||||| | | || | Sbjct 221483 GAATGCCCTCCTTGTCTTGAATCTTCGCTTTCACATTCTCAATCGTATCACTAGCCTCCA 221424 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| ||||| || || ||||| ||||| || ||||| ||||||||||| Sbjct 221423 CTTCCAATGTTATCGTCTTACCAGTCAACGTCTTCACAAATATCTGCAT 221375 Score = 122 bits (134), Expect = 6e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||| || | ||| | ||| |||||| || ||||||||||||| Sbjct 220998 TACCACCACGAAGTCGCAAAACAAGATGCAAAGTTGACTCCTTCTGGATATTGTAATCAG 220939 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || || || || || |||||||| | |||||||| || | | Sbjct 220938 ACAACGTACGACCATCTTCCAACTGCTTCCCCGCAAATATCAATCGTTGTTGGTCTGGTG 220879 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| ||||| ||| || |||||||||| || ||||| | ||| | Sbjct 220878 GAATGCCTTCCTTGTCTTGAATCTTCGCTTTCACATTCTCGATCGTATCGCTGGCTTCTA 220819 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 |||| | || || || || || ||||| || ||||| ||||||||||| || Sbjct 220818 CTTCAAGAGTGATGGTCTTCCCAGTCAAAGTCTTCACAAATATCTGCATCTT 220767 >seq6576 Length=99650 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||| || | ||| | ||| |||||| || ||||||||||||| Sbjct 35474 TACCACCACGAAGTCGCAAAACAAGATGCAAAGTTGACTCCTTCTGGATATTGTAATCAG 35533 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || || || || || |||||||| | |||||||| || | | Sbjct 35534 ACAACGTACGACCATCTTCCAACTGCTTCCCCGCAAATATCAATCGTTGTTGGTCTGGTG 35593 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| ||||| ||| || |||||||||| | ||||| | ||| | Sbjct 35594 GAATGCCTTCCTTGTCTTGAATCTTCGCTTTCACATTCTCAATCGTATCGCTGGCTTCTA 35653 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || || ||||| || ||||| || |||||||| |||||||| Sbjct 35654 CTTCAAGAGTGATGGTTTTCCCAGTCAACGTCTTCACGAAAATCTGCAT 35702 Score = 89.7 bits (98), Expect = 3e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 |||||| || ||||||||||||||||| ||| | || || || || || || ||||| Sbjct 31381 CTCCTTCTGGATATTGTAATCAGACAACGTACGACCATCTTCCAACTGCTTCCCCGCAAA 31440 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 ||| | |||||||| || | || | |||||| ||||| ||| || |||||||| Sbjct 31441 TATCAATCGTTGTTGGTCTGGTGGAATGCCTTCCTTGTCTTGAATCTTCGCTTTCACATT 31500 Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 || | ||||| | | || ||||||||||| || || Sbjct 31501 CTCAATCGTATCACTAGCCTCCACTTCTAATGTTATCGT 31539 >seq734 Length=446040 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||| |||||||||||||||||||||||||||| ||||| | |||||||| Sbjct 329166 AAGCCCGTTTCCTTGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAGTAGGAATCTCGT 329107 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||||||||| ||||| |||||||| Sbjct 329106 TAATCCATTCATGCGCGTCAGTAATTGGATGACGA 329072 >seq15946 Length=7233 Score = 114 bits (126), Expect = 9e-21 Identities = 79/89 (89%), Gaps = 8/89 (9%) Strand=Plus/Minus Query 25903 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGGGTAATCTCGTTAATCC 25962 ||||||||||||||||||| |||||||||||||||| || |||||||||||||| Sbjct 6329 AGCCCGTTCCCTTGGCTGTTGTTTCGCTAGATAGTA---AG-----AATCTCGTTAATCC 6278 Query 25963 TTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||||||||||||||||| Sbjct 6277 ATTCATGCGCGTCACTAATTAGATGACGA 6249 >seq5556 Length=145760 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| ||||||||||||||||||||| |||||||||||||||||| | ||| |||| Sbjct 122615 AAGTCCGTTCCCTTGGCTGTGGTTTTGCTAGATAGTAGATAGGGACAGTAGGAATTTCGT 122674 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||| ||||| |||||||||||||||||| Sbjct 122675 TAATCCATTCTTGCGCTTCACTAATTAGATGACGA 122709 >seq7102 Length=83310 Score = 109 bits (120), Expect = 4e-19 Identities = 86/102 (84%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| ||||||||||||||| || |||||||||||||||||| | |||||||| Sbjct 874 AAGCCCATTCCCTTGGCTGTGGGTTTGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 933 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACG-ATATCCG 25997 | |||| ||||||| ||||||||||||||| ||| |||||| Sbjct 934 TGATCCATTCATGCCCGTCACTAATTAGATTACGTTTATCCG 975 >seq926 Length=370264 Score = 109 bits (120), Expect = 4e-19 Identities = 83/98 (85%), Gaps = 5/98 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 |||| || ||||||||||||||| ||||||| |||||||||||| | |||||||| Sbjct 345651 AAGCTCGGTCCCTTGGCTGTGGTCTCGCTAGGTAGTAGATAGGGACAGTAGGAATCTCGT 345710 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGATAT 25994 |||||| ||||||||| | |||||||||||||||| || Sbjct 345711 TAATCCATTCATGCGCTTTACTAATTAGATGACGAGAT 345748 Score = 109 bits (120), Expect = 4e-19 Identities = 83/98 (85%), Gaps = 5/98 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 |||| || ||||||||||||||| ||||||| |||||||||||| | |||||||| Sbjct 346325 AAGCTCGGTCCCTTGGCTGTGGTCTCGCTAGGTAGTAGATAGGGACAGTAGGAATCTCGT 346384 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGATAT 25994 |||||| ||||||||| | |||||||||||||||| || Sbjct 346385 TAATCCATTCATGCGCTTTACTAATTAGATGACGAGAT 346422 Score = 100 bits (110), Expect = 2e-16 Identities = 81/98 (83%), Gaps = 5/98 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 |||| || ||||||||||||||| ||||||| ||||||||| || | |||||||| Sbjct 322199 AAGCTCGGTCCCTTGGCTGTGGTCTCGCTAGGTAGTAGATACGGACAGTAGGAATCTCGT 322258 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGATAT 25994 | |||| ||||||||| | |||||||||||||||| || Sbjct 322259 TGATCCATTCATGCGCTTTACTAATTAGATGACGAGAT 322296 >seq4407 Length=57087 Score = 107 bits (118), Expect = 1e-18 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| | Sbjct 4176 TTGCTCTCTCTTCAAAGTACTTTTCAACTTTCCCTCACGGTACTTGTTCGATATCGGACC 4235 Query 20004 CGCGGTAATATTTAGCCTT 20022 || | || ||||||||||| Sbjct 4236 CGAGCTAGTATTTAGCCTT 4254 >seq4037 Length=148107 Score = 107 bits (118), Expect = 1e-18 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 80773 TTACTCTCTCTTCAAAGTACTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGAACT 80714 Query 20004 CGCGGTAATATTTAGCCTT 20022 || || ||||||||||| Sbjct 80713 CGTTCTAGTATTTAGCCTT 80695 >seq2553 Length=98455 Score = 104 bits (114), Expect = 2e-17 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||| |||||||||||||||||||||||||||| ||| | || || || Sbjct 49639 AAGCCCGTTCCTTTGGCTGTGGTTTCGCTAGATAGTAGATTGGGACAACAGGAACCTTGT 49580 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||||| ||||||||||| | |||| Sbjct 49579 TAATCCATTCATGCGCATCACTAATTAGGTAACGA 49545 >seq1875 Length=193106 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || |||| |||| ||| ||||| ||||| |||||||||||||| || Sbjct 183841 CCACCGCGCAGGCGCAGAACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCCGAA 183900 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | | || || || || || ||||| || || | || || || |||| || Sbjct 183901 AGAGTTCTCCCATCCTCCAACTGCTTCCCGGCGAAAATCAATCGCTGCTGGTCGGGAGGA 183960 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||| ||| || || ||||||||||| || ||||| | ||| || Sbjct 183961 ATTCCTTCTTTATCCTGTATCTTAGCCTTCACATTCTCGATCGTATCCGAAGATTCCACC 184020 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || || || || |||||||| || ||||| ||||||||||| Sbjct 184021 TCTAGGGTGATGGTCTTGCCCGTCAAAGTCTTCACAAATATCTGCAT 184067 >seq1326 Length=435232 Score = 104 bits (114), Expect = 2e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 19951 CTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTA 20010 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | || Sbjct 35206 CTCTTCAAAGTATTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGAGCTA 35147 Query 20011 ATATTTAGCCTT 20022 ||||||||||| Sbjct 35146 GTATTTAGCCTT 35135 Score = 104 bits (114), Expect = 2e-17 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||| ||||||||||||||| |||||||||||| |||| | |||||||| Sbjct 41224 AAGCCCGTTCTCTTGGCTGTGGTTTCACTAGATAGTAGACAGGGACAGTAGGAATCTCGT 41165 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||| |||| |||||| |||||||||| Sbjct 41164 TAATCCATTCACGCGCTCCACTAACTAGATGACGA 41130 >seq45 Length=485841 Score = 104 bits (114), Expect = 2e-17 Identities = 78/92 (85%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 ||| || |||||||||| ||||||||||||||||||||||| || |||||||||| Sbjct 382207 CCCCTTGCCTTGGCTGTTGTTTCGCTAGATAGTAGATAGGGGCAGTGGGAATCTCGTTAT 382266 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||| ||||| |||||||||||||| Sbjct 382267 TCCATTCATGATCGTCAATAATTAGATGACGA 382298 Score = 104 bits (114), Expect = 2e-17 Identities = 78/92 (85%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 ||| || |||||||||| ||||||||||||||||||||||| || |||||||||| Sbjct 382675 CCCCTTGCCTTGGCTGTTGTTTCGCTAGATAGTAGATAGGGGCAGTGGGAATCTCGTTAT 382734 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||| ||||| |||||||||||||| Sbjct 382735 TCCATTCATGATCGTCAATAATTAGATGACGA 382766 >seq2317 Length=325995 Score = 100 bits (110), Expect = 2e-16 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 19946 TCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 19284 TCTCTCTCTTCAAAGTACTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCG 19225 >seq8815 Length=23705 Score = 98.7 bits (108), Expect = 7e-16 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| || Sbjct 23594 TTACTCTCTCTTCAAAGTACTTTCCAACTTTCCCTCATGGTACTTGTTCGCTATCGGACT 23535 Query 20004 CGCGGTAATATTTAGCCTT 20022 | | || || |||||||| Sbjct 23534 CATGCTAGTACTTAGCCTT 23516 >seq6840 Length=28952 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| || ||||| ||| || || || ||||| |||| Sbjct 19829 TACCACCACGTAGACGAAGAACCAAGTGTAGAGTCGACTCTTTCTGGATGTTGTAGTCAG 19888 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | ||| ||| | || || || || || || ||||| ||||| ||||| || || | | Sbjct 19889 ATAAAGTACGGCCATCTTCCAACTGCTTGCCAGCAAAAATTAGACGTTGCTGGTCTGGAG 19948 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| |||||| ||||| |||| | ||||| | || | Sbjct 19949 GAATACCTTCTTTGTCTTGAATTTTGGCTTTCACGTTCTCAATCGTATCACTGGACTCTA 20008 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || ||||| || || | ||||||||||| |||||||| Sbjct 20009 CCTCGAGAGTGATCGTTTTGCCGGTAAGTGTTTTCACGAAGATCTGCAT 20057 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 38083 AATCATT-ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTG 38141 ||| ||| |||||| | |||||||| || ||||| | || ||| || || || ||| Sbjct 19594 AATTATTGACCACCGCGTAAACGCAAAACTAAATGTAAGGTTGACTCTTTCTGGATGTTG 19653 Query 38142 TAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGA 38201 || ||||| ||| ||| | || || || || || || ||||| ||||| ||||| || Sbjct 19654 TAGTCAGATAAAGTACGGCCATCTTCCAACTGCTTGCCAGCAAAAATTAGACGTTGCTGG 19713 Query 38202 TCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCA 38261 || | || | ||||||||||| |||||| ||||| |||| | ||||| | Sbjct 19714 TCTGGAGGAATACCTTCTTTGTCTTGAATTTTGGCTTTCACGTTCTCAATCGTATCACTG 19773 Query 38262 CTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || | || || ||||| || || | || |||||||| || ||||| Sbjct 19774 GACTCTACCTCGAGAGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATTTGCAT 19829 >seq4514 Length=55800 Score = 95.1 bits (104), Expect = 8e-15 Identities = 78/95 (82%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| |||||||||||||||| |||| |||||||||||| || | |||||||| Sbjct 21461 AAGCCTGTTCCCTTGGCTGTGGCTTCGTCAGATAGTAGATAAGGACAGTAGGAATCTCGT 21520 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||| | ||||||| ||||||| || Sbjct 21521 TAATCCATTCATGCCCTTCACTAACTAGATGATGA 21555 >seq8892 Length=38569 Score = 93.3 bits (102), Expect = 3e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| || Sbjct 32058 TTACTCTCTCTTCAAAGTACTTTTTAACTTTCCCGTACGGTACTTGTTCGCTATCGGACT 31999 Query 20004 CGCGGTAATATTTAGCCTT 20022 || || |||| |||||| Sbjct 31998 CGTACTAGTATTGAGCCTT 31980 >seq6844 Length=104492 Score = 89.7 bits (98), Expect = 3e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || ||||| ||||||||| |||||||||||||| || ||||||||||| ||| |||| || Sbjct 26123 TTACTCTCCCTTCAAAGTACTTTTCAACTTTCCGTCCCGGTACTTGTTTGCTTTCGGACT 26182 Query 20004 CGCGGTAATATTTAGCCTT 20022 || | | ||||||||||| Sbjct 26183 CGTGCTGGTATTTAGCCTT 26201 Score = 89.7 bits (98), Expect = 3e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || ||||| ||||||||| |||||||||||||| || ||||||||||| ||| |||| || Sbjct 45042 TTACTCTCACTTCAAAGTACTTTTCAACTTTCCGTCCCGGTACTTGTTTGCTTTCGGACT 44983 Query 20004 CGCGGTAATATTTAGCCTT 20022 || | | ||||||||||| Sbjct 44982 CGTGCTGGTATTTAGCCTT 44964 >seq5962 Length=35980 Score = 89.7 bits (98), Expect = 3e-13 Identities = 75/92 (82%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25903 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGTT 25957 ||||||||||||||||| | ||||||||| ||| |||| | | | ||||||||| Sbjct 21635 AGCCCGTTCCCTTGGCTCTTCTTTCGCTAGGTAGCAGATGGAGACAACAGGAATCTCGTT 21694 Query 25958 AATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 ||||| ||||||| ||||||||||||||||| Sbjct 21695 AATCCAGTCATGCGAGTCACTAATTAGATGAC 21726 >seq16998 Length=5513 Score = 87.8 bits (96), Expect = 1e-12 Identities = 60/68 (88%), Gaps = 5/68 (7%) Strand=Plus/Minus Query 25929 CTAGATAGTAGATAGGGG-----GTAATCTCGTTAATCCTTTCATGCGCGTCACTAATTA 25983 ||||||||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct 5513 CTAGATAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 5454 Query 25984 GATGACGA 25991 |||||||| Sbjct 5453 GATGACGA 5446 >seq13876 Length=6480 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| | ||||| |||||||| || | |||||| | Sbjct 1825 AAGCCCGTTCCCTTGGCTGTGGCTCCGCTATGCAGTAGATAAGGACAGTAGGAATCTCTT 1766 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||| ||||| || ||||||||| Sbjct 1765 TGATCCATTCATGCGCTTCACTCATCAGATGACGA 1731 >seq8355 Length=33020 Score = 82.4 bits (90), Expect = 5e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19946 TCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 || |||||||| |||| | |||||||||||||||||| ||| ||||||||||||| |||| Sbjct 927 TCCCTCTCTTCGAAGTACCTTTCAACTTTCCCTCACGCTACCTGTTCGCTATCGGACTCG 868 Query 20006 CGGTAATATTTAGCC 20020 | || ||| |||| Sbjct 867 TGCTAGCATTAAGCC 853 >seq3052 Length=185254 Score = 82.4 bits (90), Expect = 5e-11 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || ||||||||||||||| |||| |||||| || ||||||||||||||||||||||| || Sbjct 31161 TTACTCTCTCTTCAAAGTACTTT-CAACTTCCCTTCACGGTACTTGTTCGCTATCGGACT 31103 Query 20004 CG 20005 || Sbjct 31102 CG 31101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334864911637298