Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq393 100 3e-16 >seq393 Length=352657 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 172799 TTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACT 172858 || || || || ||||| |||||||||| ||| |||||||| ||| |||||||| ||| Sbjct 19852 TTGCCCCGTAGTGGGAAAACACCGTAGTTATCCCGACCAACAACACCGAGACCAGCTACT 19793 Query 172859 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCC 172918 || |||| || || || || ||||| || | |||||||||||| || | | Sbjct 19792 GCCAGGGATTTGGCTGAGTCTCCCTCGGTAAGGATGAGCGTACAAGAAGATGAGTTTTTG 19733 Query 172919 GTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACC 172956 || || || ||||| |||||||||||||| || || || Sbjct 19732 GTGCCTGCATTGTTTGCATCGTCCAACTTAGGTATGCC 19695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597203081826640