Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1344 183 2e-40 seq495 176 4e-38 seq309 174 1e-37 seq6840 122 7e-22 seq53 102 7e-16 seq386 98.7 8e-15 >seq1344 Length=146228 Score = 183 bits (202), Expect = 2e-40 Identities = 416/621 (67%), Gaps = 6/621 (1%) Strand=Plus/Plus Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 ||| | || ||| | | ||| ||||| |||| | | || |||| | | || ||| Sbjct 79468 GAAATTGACTCACTGTATGAAGGAATCGATTTTTACACCAGTATTACACGAGCACGATTC 79527 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| || ||| | ||||| ||| | | || | || || |||||| | | ||| || Sbjct 79528 GAAGAAATATGTGCGGATCTGTTTCGTAGCACCTTGGATCCGGTAGAAAAGGCGTTACGA 79587 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 ||| | || | ||||| | || | |||||||| || || || ||||| || || ||| Sbjct 79588 GATGCGAAACTGGATAAGACACAAATTCATGAAATCGTACTCGTCGGTGGTTCGACGAGA 79647 Query 552147 ATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 ||||| ||| |||| || | || ||| || |||||||| || |||| || || Sbjct 79648 ATTCCAAAAGTTCGAAAATTATTGCAAGAATTT--TTCAATGGAAAGGAATTGAACAAAT 79705 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | ||||||||||| ||||| || || ||||| ||| |||| || |||||| | || Sbjct 79706 CAATCAATCCAGATGAAGCTGTGGCTTACGGTGCAGCAGTTCAGGCTGCTATTTTGAGTG 79765 Query 552265 GACA-AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 || | || | | || | || ||||| | | | ||||| ||||||||||| ||| Sbjct 79766 GAGATAAGTCA-GATGTGGTTCAGGATATTTTGTTGCTGGATGTGACTCCTCTATCCCTT 79824 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 || |||||||||| || ||| |||||||| ||||| | | || ||||| || || Sbjct 79825 GGATTAGAAACAGCCGGTGGTGTTATGACTCCGCTTATTAAACGCAACACTACGATACCA 79884 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 ||| | | | | || | |||||||||||| |||| | | ||| || ||| Sbjct 79885 ACAAAACAGACACAAATTTTCACCACGTATTCAGATTATCAGCCCGGTGTGTTGATACAA 79944 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 ||| || || ||| || | || ||||| |||| | |||| ||| | | Sbjct 79945 GTTTACGAGGGTGAACGAGCTATGACCCGGGATAACAATCTGTTGGGTAAGTTTGAACTC 80004 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 || | || || || || ||||| |||||||| || || || || || || || ||| Sbjct 80005 TCCGGATTCCCGCCGGCACCACGTGGTGTACCGCAGATAGAGGTCACATTTGACATTGAT 80064 Query 552564 GCCAATGGAATTTTGAATGTG 552584 || || ||||||||||| ||| Sbjct 80065 GCAAACGGAATTTTGAACGTG 80085 Score = 107 bits (118), Expect = 2e-17 Identities = 368/559 (66%), Gaps = 26/559 (5%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || ||||| ||| |||| || || | || || | ||||| |||| ||| Sbjct 78636 AGCGATTGGTATTGATCTAGGCACTACTTTCTCCTGCGTGGCTGTTTTCTCAAATAATAA 78695 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| || || ||||||||||| || || || |||| || || |||||| | ||||| Sbjct 78696 AGTGGAGATCATTGCCAATGACCAGGGCAATCGAACAACACCTAGTTATGTGGCATTCAC 78755 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAA---GCCACTGGTAATCCTAC 550167 || || ||| | | || |||||||| ||| | ||| |||| || |||||| | Sbjct 78756 AGATACGGAAAGACTGATAGGAGATGCAGCCAAAAACCAAGTGGCCA-TG--AATCCTGC 78812 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||||| | |||||||| ||||| || ||||| || | ||| | ||| || | || Sbjct 78813 GAATACCGTCTTTGATGCCAAACGGTTGATTGGCCGACGATTTGACGATCCGGCGGTAAC 78872 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA---ATGTTTCTGGAAAACCTTATAT 550284 | ||| ||| || ||||| || | ||| | | || || ||||| | || Sbjct 78873 CGATGATCGGAAACAGTGGCCATT---TACTGTGATCGACGTGAACGGGAAACCAAAAAT 78929 Query 550285 TGAAG-CTACTCATGAAGGATCTGTTAAAC--AAT-TTTC--ACCAGAACAAATTTCATC 550338 ||| | | | || |||| || | || ||| |||| || ||| | || ||||| Sbjct 78930 ACAAGTCCAGT-AT-AAGG----GTGAGACGAAATCTTTCTTCCCCGAAGAGATATCATC 78983 Query 550339 TATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGG 550397 ||||| || ||||| ||| | ||||| || | | || ||||| || || | Sbjct 78984 AATGGTGTTGATGAAGATGCGGGAGACAGCAGAAGCGTACATCGG-CAAGACCGTGACTG 79042 Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 | || || ||||| ||||| |||||||| || ||| | || || || ||||||| Sbjct 79043 ACAGTGTGATTACTGTGCCAGCTTATTTTAACGATAGTCAAAGACAGGCCACAAAAGATG 79102 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| || || || | ||||| || | || ||||| || || || || || || Sbjct 79103 CTGGAACAATCGCAGGTTTGAATGTACTAAGAATAATCAACGAGCCGACAGCAGCCGCCA 79162 Query 550518 TTGCATATGGACTTGATAA 550536 ||||||| ||| | ||||| Sbjct 79163 TTGCATACGGATTGGATAA 79181 >seq495 Length=264196 Score = 176 bits (194), Expect = 4e-38 Identities = 370/547 (68%), Gaps = 20/547 (4%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| || || ||||| ||||| || || ||||| || || | || ||||||| Sbjct 104836 AGCTATCGGAATCGATTTGGGAACTACCTACTCCTGTGTAGGAGTGTTCCAGCATGGTAA 104895 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| ||||| || |||||||| ||| |||| || || |||||| ||||||| Sbjct 104896 GGTGGAAATCATTGCGAACGATCAAGGGAACCGAACAACACCGAGTTATGTGGCTTTCAC 104955 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTAC 550167 ||| || |||| | | || ||||| |||||| | |||| ||| || ||||| || Sbjct 104956 GGACACGGAACGACTGATCGGAGATGCTGCAAAAAACCAAGTGGCCA-TG--AATCCGAC 105012 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||||| | || ||||| ||||| |||| || || | ||| ||||| || | || Sbjct 105013 AAATACAGTGTTCGATGCGAAACGCCTAATCGGGCGACGATTTGATGATGCGTCGGTGAC 105072 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 || ||| |||||| ||||| ||| || | ||| || | ||| | || Sbjct 105073 GGAGGATCGGAAGCACTGGCCGTTCGAAGTGGTTCGTGACGGCGACAAAGC-------GA 105125 Query 550288 AGCTACTCATGAAGGATCTG--TTA-AACAATTT----TCACCAGAACAAATTTCATCTA 550340 || | | | || || || || | | || || || ||| | || | || || |||| Sbjct 105126 AGATTCGCGTGGAGTATATGGGTGAGAAGAAATTGTTCTCAGCTGAGGAGATCTCGTCTA 105185 Query 550341 TGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATG 550400 ||||||| | ||| ||||| | | || ||||| | || |||| || | |||| Sbjct 105186 TGGTTTTGACGAAGATGAAGGAGATTGCGGCTGCTTACCTAGGCAAAGACGTGAAAGATG 105245 Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 | || || ||||| || || ||||| |||||| || ||||| || || || ||| ||| Sbjct 105246 CGGTGATCACTGTTCCTGCCTATTTCAATGACAGTCAGCGTCAGGCGACGAAGGATTCTG 105305 Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520 | || || ||| | ||||| | || || ||||| || || |||||||| || ||| Sbjct 105306 GTGCGATAGCCGGATTGAATGTGTTACGCATAATCAACGAGCCGACTGCTGCCGCGATTG 105365 Query 550521 CATATGG 550527 | ||||| Sbjct 105366 CGTATGG 105372 Score = 168 bits (186), Expect = 5e-36 Identities = 368/546 (67%), Gaps = 20/546 (4%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||||||||||| || || ||||| || || | || ||||||| Sbjct 130455 GCTATCGGAATCGATTTAGGAACTACCTACTCCTGTGTAGGAGTGTTCCAGCATGGTAAG 130514 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| ||||| || |||||||| ||| |||| || || |||||| |||||||| Sbjct 130515 GTGGAAATCATTGCGAACGATCAAGGGAACCGAACAACACCGAGTTATGTGGCTTTCACG 130574 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAA---GCCACTGGTAATCCTACC 550168 || || |||| | | || ||||| ||||| | ||| |||| || ||||| || Sbjct 130575 GACACAGAACGACTGATCGGAGATGCTGCAAAGAACCAAGTGGCCA-TG--AATCCGACA 130631 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 ||||| | || ||||| ||||| |||| ||| || | ||| ||||| | | || | Sbjct 130632 AATACAGTGTTCGATGCGAAACGCCTAATCGGACGACGATTTGATGATGCTTCGGTGACG 130691 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 | ||| |||||||||||| ||| | | || ||| || ||| | | ||| Sbjct 130692 GAGGATCGGAAGCATTGGCCATTCGA----GGTAGTGT---CAGAGAACGGTGTCCCGAA 130744 Query 550289 GCTACTCATGAAGGATC-TGTTAAACA------ATTTTCACCAGAACAAATTTCATCTAT 550341 | | | | || | || | |||| || ||| | || | || || ||||| Sbjct 130745 AATTCGCGTTGAGTTCCGTGGTGAACAGAAAACGTTCTCAGCTGAGGAGATCTCGTCTAT 130804 Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGC 550401 |||||| | ||| ||||| | | || | ||||| | || |||| || | ||||| Sbjct 130805 GGTTTTGACGAAGATGAAGGAGATTGCGAATGCTTACCTGGGCAAAGACGTGAAAGATGC 130864 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || || ||||| || || ||||| |||||| || ||||| || || || ||| |||| Sbjct 130865 GGTGATCACTGTTCCTGCCTATTTCAATGACAGTCAGCGTCAGGCGACGAAGGATTCTGG 130924 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 || || ||| | ||||| | || || ||||| || || |||||||| || |||| Sbjct 130925 TGCGATAGCCGGATTGAATGTGTTACGCATAATCAACGAGCCGACTGCTGCCGCGATTGC 130984 Query 550522 ATATGG 550527 ||||| Sbjct 130985 GTATGG 130990 Score = 168 bits (186), Expect = 5e-36 Identities = 368/546 (67%), Gaps = 20/546 (4%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||||| ||||| || || ||||| || || | || ||||||| Sbjct 159637 GCTATCGGAATCGATTTGGGAACTACCTACTCCTGTGTAGGAGTGTTCCAGCATGGTAAG 159696 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| ||||| || |||||||| ||| |||| || || |||||| |||||||| Sbjct 159697 GTGGAAATCATTGCGAACGATCAAGGGAACCGAACCACACCGAGTTATGTGGCTTTCACG 159756 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTACC 550168 || || |||| | | || ||||| ||||| | |||| ||| || ||||| || Sbjct 159757 GACACGGAACGACTGATCGGAGATGCTGCAAAGAACCAAGTGGCCA-TG--AATCCGACA 159813 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 ||||| | || ||||| ||||| |||| ||| || | ||| ||||| || | || | Sbjct 159814 AATACAGTGTTCGATGCGAAACGCCTAATCGGACGACGATTTGATGATACGTCGGTGACG 159873 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 | ||| |||||||||||| ||| | | || ||| || ||| | | || Sbjct 159874 GAGGATCGGAAGCATTGGCCATTCGA----GGTAGTGT---CAGAGAACGGTGTCCCAAA 159926 Query 550289 GCTACTCATGAAGGATC-TGTTAAACA------ATTTTCACCAGAACAAATTTCATCTAT 550341 | | | | || | || | |||| || ||| | || | || || ||||| Sbjct 159927 AATTCGCGTTGAGTTCCGTGGTGAACAGAAAACGTTCTCAGCTGAGGAGATCTCGTCTAT 159986 Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGC 550401 |||||| ||||| ||||| | | || | ||||| | || |||| || | ||||| Sbjct 159987 GGTTTTGATGAAGATGAAGGAGATTGCGAATGCTTACCTGGGCAAAGACGTGAAAGATGC 160046 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || || ||||| || || ||||| |||||| || ||||| || || || ||| |||| Sbjct 160047 GGTGATCACTGTTCCTGCCTATTTCAATGACAGTCAGCGTCAGGCGACGAAGGATTCTGG 160106 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 || || ||| | ||||| | || || ||||| || || |||||||| || |||| Sbjct 160107 TGCGATAGCCGGATTGAATGTGTTACGCATAATCAACGAGCCGACTGCTGCCGCGATTGC 160166 Query 550522 ATATGG 550527 ||||| Sbjct 160167 GTATGG 160172 >seq309 Length=278515 Score = 174 bits (192), Expect = 1e-37 Identities = 400/596 (67%), Gaps = 30/596 (5%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || ||||| || || || || |||||||||||||| ||| | || || Sbjct 121074 GCGATTGGGATTGATTTGGGCACTACTTACTCTTGTGTTGGTGTTTTTCAACACGGAAAG 121015 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||||||||||||| || || ||||| || | || || || ||||||| | ||||| Sbjct 121014 GTTGAAATTATTGCGAACGACCAAGGCAATCGTACAACGCCCAGTTATGTTGCATTCACA 120955 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTACC 550168 || || |||| | | ||||||| || || ||| | |||| ||| || || || | | Sbjct 120954 GACACCGAACGTCTGATTGGTGACGCTGCGAAAAACCAAGTGGCCA-TG--AACCCCAAC 120898 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || || ||||||| || ||||| | ||||| | |||| | |||| | ||||| Sbjct 120897 AACACCGTTTTTGACGCCAAACGCCTCATTGGTCGTCGTTTCAGTGATCC-----TTCAG 120843 Query 550229 GCAGATATGA-----AGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATA 550283 || || ||| | || ||| | || | |||| | |||| | ||| || | Sbjct 120842 TCACATCTGATCGCAAACACTGGTCGTTTGAG---GTTA---TCTCTG-AGAACGATAAA 120790 Query 550284 TTGAAGCTACTCATGAAGGATCTGT------TAAACA-ATTTTCACCAGAACAAATTTCA 550336 |||| | | || || || | | || | ||| ||| | ||| | ||||| Sbjct 120789 CCGAAGATTCGTGTGGAGTATAAGGGCGAGATGAAGACATTCTCAGCTGAAGAGATTTCC 120730 Query 550337 TCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACG 550396 |||||| | | |||||||||||| || ||| | | | || | |||| ||| Sbjct 120729 TCTATGATACTGATGAAAATGAAAGAAGTTGCCGAAGGATACCTGGGAAAGAAAGTGACG 120670 Query 550397 GATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGAT 550456 ||||| || | ||||| || || || || || ||| || || ||||| || || ||| Sbjct 120669 GATGCCGTGGTCACTGTGCCCGCTTACTTCAACGACAGTCAGCGGCAAGCAACGAAGGAT 120610 Query 550457 GCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCA 550516 ||||| |||| |||| ||||||||| | || || ||||| || || || |||||||| Sbjct 120609 GCTGGTGCTATTTCTGGTCTTAATGTTTTGCGCATAATCAACGAGCCCACGGCTGCTGCT 120550 Query 550517 CTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGA 550572 |||| ||||| || |||||| | | | ||||| || || ||||||||||| Sbjct 120549 ATTGCCTATGGGCTGGATAAAAAGGTCGGTGGAGAACGCAACGTGCTCATCTTTGA 120494 >seq6840 Length=28952 Score = 122 bits (134), Expect = 7e-22 Identities = 139/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || ||||| |||| || ||| | |||||| | || || || |||||||| || | | Sbjct 19648 ATGTTGTAGTCAGATAAAGTACGGCCATCTTCCAACTGCTTGCCAGCAAAAATTAGACGT 19707 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||| || |||||||| |||||||| ||||||||||| ||| || |||||| ||| Sbjct 19708 TGCTGGTCTGGAGGAATACCTTCTTTGTCTTGAATTTTGGCTTTCACGTTCTCAATCGTA 19767 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 ||| || || | | |||||||| | ||||| || ||||| || || ||||||||||| Sbjct 19768 TCACTG-GACTCTACCTCGAGAGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATTTG 19826 Query 563472 CATA 563475 |||| Sbjct 19827 CATA 19830 Score = 116 bits (128), Expect = 3e-20 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || ||||| |||| || ||| | |||||| | || || || |||||||| || | | Sbjct 19876 ATGTTGTAGTCAGATAAAGTACGGCCATCTTCCAACTGCTTGCCAGCAAAAATTAGACGT 19935 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||| || |||||||| |||||||| ||||||||||| ||| || |||||| ||| Sbjct 19936 TGCTGGTCTGGAGGAATACCTTCTTTGTCTTGAATTTTGGCTTTCACGTTCTCAATCGTA 19995 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 ||| || || | | |||||||| | ||||| || ||||| ||||| ||||| || || Sbjct 19996 TCACTG-GACTCTACCTCGAGAGTGATCGTTTTGCCGGTAAGTGTTTTCACGAAGATCTG 20054 Query 563472 CAT 563474 ||| Sbjct 20055 CAT 20057 >seq53 Length=770668 Score = 102 bits (112), Expect = 7e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 549993 CTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAG 550052 |||| | || ||||||||||| || || || | | || || | ||| |||| || | Sbjct 140520 CTATCTGAATCGATTTAGGAACTACCTACCCTTTTTTAGGAGTGTTCCAACATGGCAAGG 140579 Query 550053 TTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 | ||||| ||||| || |||||||| ||| |||| || || | |||| ||||||||| Sbjct 140580 TGGAAATCATTGCGAACGATCAAGGGAACCGAACCACACCGAGTAATGTGGCTTTCACGG 140639 Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 || | |||| | | | |||| ||||| |||||| | | | ||||| || |||| Sbjct 140640 AAGCAGAACGACTGATCGAAAATGCTGCAAAGAATCAAGTCGCCAGGAATCCGACGAATA 140699 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGA 550201 || | || ||||| ||||| |||| ||| Sbjct 140700 CTGTGTTCGATGCGAAACGCCTAATCGGA 140728 >seq386 Length=588428 Score = 98.7 bits (108), Expect = 8e-15 Identities = 136/190 (72%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 550397 GATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGAT 550456 |||||||| | ||||||||||| ||||| ||| || | || || |||||||| || || Sbjct 117865 GATGCAGTTGTCACTGTACCAGCTTATTTCAATAACACCCAGCGCCAAGCTACCAAGGAC 117806 Query 550457 GCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCA 550516 || ||| |||||| || | ||||| ||||| | |||| |||||| ||||| || ||| Sbjct 117805 GCCGGAATTATTGCCGGTTTGAATGTGCTTCGGGTAATCAGTGAACCAACTGCGGCCGCA 117746 Query 550517 CTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGAT--- 550573 | || || ||| | || ||| || | | ||| |||||| || | | |||| Sbjct 117745 ATCGCTTACGGATTAGACAAAACAAAAAAGAAGGAATGTAATGTTCTTGTGTATGATCTC 117686 Query 550574 TGTGGAGGTA 550583 ||||||||| Sbjct 117685 GGTGGAGGTA 117676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028229954047420