Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2980 96.9 3e-15 >seq2980 Length=300508 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 34345 CACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGG 34404 ||||| || ||||| ||||||||||||||||| || |||||||| ||| ||||| Sbjct 154972 CACAAAACGAACTTTTTGATGAAACCATCAAGCAATTCTTGTAACTTTGCGGCCTCGTGT 154913 Query 34405 GAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCG 34464 | || || |||||| | || |||||| ||| || || || |||| || || |||||| Sbjct 154912 GCACCATTAACGATGTAGCGCTCGTTTCTGTCGTCCACATGAATTTGGGCTCCTAGCTCG 154853 Query 34465 CACCCGAAGTACTTTGTC 34482 || || ||| |||| ||| Sbjct 154852 CAGCCAAAGAACTTCGTC 154835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412740174881894