Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq309 351 7e-91 seq1344 338 5e-87 seq495 154 1e-31 seq9461 143 2e-28 seq53 91.5 1e-12 >seq309 Length=278515 Score = 351 bits (388), Expect = 7e-91 Identities = 978/1481 (66%), Gaps = 36/1481 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 |||||| | || | |||||| |||||||| || ||||| | ||||| || || || || Sbjct 119612 TTATCAACTGCTGACACATTCAGAATACCGTTCGCATCTATGTCAAACGTCACCTCGATC 119671 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 || || || || | | || || ||||| || || | ||| | || || ||| Sbjct 119672 TGGGGCACACCCCGAGGTGCCGGAGGGATGCCAGACAGTTCAAACTTCCCGAGCAAATTG 119731 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || ||| | || | | || ||||||||| | | || || ||| ||| || ||| Sbjct 119732 TTGTCTCTGGTCATTGCACGCTCACCCTCGTACACCTGTATCAAAACGCCAGGCTGGTTA 119791 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAAT 281655 || |||||||| || || | |||| ||| |||| || |||||||||||||| | || Sbjct 119792 TCAGAATAAGTGGTGAA-AGTCTGAGTTTGTTTAGTGGGTATTGTTGTGTTTCTCTTGAT 119850 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715 | ||||||| |||||| || || || | ||| | |||||||| | ||||| | Sbjct 119851 CAGGGCAGTCATAACACCACCGGCCGTCTCCAGACCCAATGAAAGAGGTGCCACATCCAG 119910 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 281775 || || | | || | ||| | | ||| || || |||||||| | ||| Sbjct 119911 TAAGAGCAAGTCCTGCACCGCCTCAGACTTGTCACCGCTCAGGATGGCTGCTTGCACAGC 119970 Query 281776 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 281835 |||||||||||| ||||| || || ||||| | | | || | || ||||| ||||| Sbjct 119971 AGCACCATATGCCACAGCCTCGTCGGGATTGATTGACTTGTTCAATTCCTTACCGTTGAA 120030 Query 281836 AAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894 |||| || || || || | | || || |||||||| | || || ||||| | |||| Sbjct 120031 GAAATCCTGTAACAACTTCTGT-ACTTTCGGAATACGTGTCGAACCACCAACGAGAACAA 120089 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAA--ACTTTTTCAACGGGTTC 281952 | ||||| | ||| ||| |||| ||||| ||| |||| || || | | ||||| Sbjct 120090 TCTCATGGATCTGATTTTTGTCCATTTTTGCATCACGTAAAGAACGTTCT-ACCGGGTCT 120148 Query 281953 AAGACCAGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 282011 ||| ||| | ||||| || | ||||||||||| |||| || | ||| Sbjct 120149 AAGGT--GCTACGGAACAAATCCGCGTTCAGTTCTTCGAAACGCGCTCGTGTTAT--TGA 120204 Query 282012 CAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 282069 | || || |||| || ||| | | ||||| | |||||| | | || | || Sbjct 120205 AGTGTAGAAATCAACACCCTCGTAGAGCGAATCGATTTCAATATTGGCCTGGGCGCTGGA 120264 Query 282070 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA 282129 | || | || ||||| || ||||| || || | | || || | || | | | Sbjct 120265 ACTCAGAGTGCGCTTAGCCCGCTCACAGGCAGTGCGCAATCGGCGAACAGCACGT--TTA 120322 Query 282130 TTGATTC--AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAA 282185 ||| | | ||| | || | ||||||||||| |||| || | | ||| | || | Sbjct 120323 TTGTCGCTGATATCCTTCTTGTGCTTTCTCTTGAATTCTTGAATAAA--ATGGCTAACCA 120380 Query 282186 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 282245 |||||| |||||||||||||| || | | ||| | || | || | | | || | | Sbjct 120381 AACGATTGTCAAAATCTTCACCGCCTAGGTGAGTGTCCCCAGCGGTCGATTTCACCTCAA 120440 Query 282246 AAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAA 282305 | | || ||||| | || | || || |||||| |||||| ||||||| ||||| | Sbjct 120441 ACACACCGTCTTCGATAGTAAGAATAGAGACATCAAAGGTTCCGCCACCCAAGTCAAAGA 120500 Query 282306 TAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAG 282365 | || || || |||| | |||||||| || ||||| |||| ||||||||| | Sbjct 120501 TGAGCACGTTGCGTTCTCCACCGACCTTTTTATCCAGCCCATAGGCAATAGCAGCAGCCG 120560 Query 282366 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 282425 | || || || || || | ||||||||||||||||| ||| || ||||| || || | Sbjct 120561 TGGGCTCGTTGATTATGCGCAAAACATTAAGACCAGAAATAGCACCAGCATCCTTCGTTG 120620 Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485 |||| | || ||||| || || || || ||||| | |||||||| || |||| | Sbjct 120621 CTTGCCGCTGACTGTCGTTGAAGTAAGCGGGCACAGTGACCACGGCATCCGTCACTTTCT 120680 Query 282486 TTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 |||| | || | || || ||||||||| | | ||||| || ||||| | || Sbjct 120681 TTCCCAGGTATCCTTCGGCAACTTCTTTCATTTTCATCAGTATCATAGAGGAAATCTCTT 120740 Query 282546 CTG--GAGAATATTGCTTGGATTCATTTTGATATGATACTTCA---AAATAT--GGTTTA 282598 | | ||||| || ||||| | | | ||||| || ||| | |||||| Sbjct 120741 CAGCTGAGAA-------TGTCTTCATCTCGCCCTTATACTCCACACGAATCTTCGGTTTA 120793 Query 282599 TTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCA 282658 | || ||||| | ||| | ||| | ||| ||| ||| || | ||| Sbjct 120794 TCGTTCTCAGAGATAACCTCAAACGACCAGTGTTTGCGATCAGATGTGACTGAAGGATCA 120853 Query 282659 TTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCA 282718 | ||| | |||||| | ||||| || ||||||| || ||| | || || | || Sbjct 120854 CTGAAACGACGACCAATGAGGCGTTTGGCGTCAAAAACGGTGTTGTTGGGGTTCATGGCC 120913 Query 282719 GCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGAT 282778 |||| | ||| || || || ||||||||| |||| || ||||| |||| |||||| Sbjct 120914 ACTTGGTTTTTCGCAGCGTCACCAATCAGACGTTCGGTGTCTGTGAATGCAACATAACTG 120973 Query 282779 GGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACA 282838 || ||||| ||||| ||||| || ||||||||||||||||| || || | ||| | ||| Sbjct 120974 GGCGTTGTACGATTGCCTTGGTCGTTCGCAATAATTTCAACCTTTCCGTGTTGAAAAACA 121033 Query 282839 CCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 || |||||| |||| || || |||||||| ||||| || Sbjct 121034 CCAACACAAGAGTAAGTAGTGCCCAAATCAATCCCAATCGC 121074 >seq1344 Length=146228 Score = 338 bits (374), Expect = 5e-87 Identities = 960/1458 (66%), Gaps = 18/1458 (1%) Strand=Plus/Minus Query 281431 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 281490 ||| || | ||| || || ||||| | ||||||||||| || || || || || || | Sbjct 80085 CACGTTCAAAATTCCGTTTGCATCAATGTCAAATGTGACCTCTATCTGCGGTACACCACG 80026 Query 281491 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 281550 | || || |||| || | | ||| | |||| ||| ||||| || | Sbjct 80025 TGGTGCCGGCGGGAATCCGGAGAGTTCAAACTTACCCAACAGATTGTTATCCCGGGTCAT 79966 Query 281551 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 281610 ||||||||||||| ||| ||| || || | | |||| ||||||||| || || Sbjct 79965 AGCTCGTTCACCCTCGTAAACTTGTATCAACACACCGGGCTGATAATCTGAATACGTGGT 79906 Query 281611 AAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670 || | | | | ||| || || || ||||| | | ||||| ||||||| Sbjct 79905 GAAAATTTGTGTCTGTTTTGTTGGTATCGTAGTGTTGCGTTTAATAAGCGGAGTCATAAC 79846 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 |||||| ||||||||||| ||||| || |||||||| ||||| | | | ||||| || Sbjct 79845 ACCACCGGCTGTTTCTAATCCAAGGGATAGAGGAGTCACATCCAGCAACAAAATATCCTG 79786 Query 281731 AAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789 || || | | || | ||| | |||||| || |||| || ||||| || || | Sbjct 79785 AACCACATC-TGACTTATCTCCACTCAAAATAGCAGCCTGAACTGCTGCACCGTAAGCCA 79727 Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGA 281848 |||||||||| ||||| | | || || | || || ||||||||||| | ||| || | Sbjct 79726 CAGCTTCATCTGGATTGATTGATTTGTTCAATTCCTTTCCATTGAAAAATTCTTGCAATA 79667 Query 281849 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 281908 | || || || || ||||| | | || || || || | ||| |||||||| | ||| Sbjct 79666 ATTT-TCGAACTTTTGGAATTCTCGTCGAACCACCGACGAGTACGATTTCATGAATTTGT 79608 Query 281909 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT-CTAAA 281967 | ||||||||||| | ||| ||| | ||||| || || || | | ||| | ||| Sbjct 79607 GTCTTATCCAGTTTCGCATCTCGTAACGCCTTTTCTACCGGATCCA-AGGTGCTACGAAA 79549 Query 281968 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCC 282027 || || | ||| | |||||||||| |||| |||| | || | | |||| ||||| Sbjct 79548 CAGATCCGCACATATTTCTTCGAATCGTGCTCGTGTAATACTGGTGTAAAAATCGATTCC 79489 Query 282028 TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGC 282087 ||| ||| || |||| ||| | ||| || | | | || | |||||| || Sbjct 79488 TTCATACAGTGAGTCAATTTCTAGGTTAGCCTGTGCACTGGCACTGAGAGTACGTTTTGC 79429 Query 282088 ACGTTCACATGCTGTCCTTAGTCTTCGTAAGG--CTTTTGCTGATTGATTCAAATCTGTT 282145 | || || || || | | | || || || | ||| || || ||| |||| | Sbjct 79428 TCTCTCGCAGGCGGTACGCAACCGTCTTATGGATCGTTTACT--TTCGGTCAGATCTTTC 79371 Query 282146 TTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTT 282203 |||| ||| | ||||| || | ||| | ||| | || || || ||||||||||| Sbjct 79370 TTATGTTTCCGTTTGAATTCCTGAACGAA--ATGGCTGACCAGTCGGCCATCAAAATCTT 79313 Query 282204 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 282263 |||| || | | || | || | || | | | |||| ||| | || ||||| | | Sbjct 79312 CACCACCAAGGTGTGTGTCACCAGCTGTGGATTTCACTTCGAACACACCCTCTTCCATTG 79253 Query 282264 ACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT 282323 ||||| | || ||| || |||||||||| |||||||| || |||||| || Sbjct 79252 CCAAAATCGACACGTCAAACGTGCCACCACCCAAGTCAAAAATCAGAACATTCCGCTCGC 79193 Query 282324 TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383 | | || ||||| | || || |||| || || || || || || || || |||| Sbjct 79192 TCCCGCTTTTCTTATCCAATCCGTATGCAATGGCGGCTGCTGTCGGCTCGTTGATTATTC 79133 Query 282384 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 282443 | | ||||| | ||| || ||| |||| |||||||| ||||| |||||||| ||||| Sbjct 79132 TTAGTACATTCAAACCTGCGATTGTTCCAGCATCTTTTGTGGCCTGTCTTTGACTATCGT 79073 Query 282444 TAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTG 282503 ||||||| || || |||||||| || || || || || || || || || || Sbjct 79072 TAAAATAAGCTGGCACAGTAATCACACTGTCAGTCACGGTCTTGCCGATGTACGCTTCTG 79013 Query 282504 CTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTG-CTTG 282562 |||| | ||| || | || | ||||||||| || | ||| || ||| | | || Sbjct 79012 CTGTCTCCCGCATCTTCATCAACACCATTGATGATATCTCTTC-GGGGAAGAAAGATTTC 78954 Query 282563 GATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAAT 282622 | ||| | ||| |||| | | |||||| || | || || ||||| Sbjct 78953 GTCTCACCCTTATACTGGACTTGTATTTTTGGTTTCCCGTTCACGTCGATCACAGTAAAT 78894 Query 282623 GGCCAATATTTCATATC-TGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCG 282681 ||||| | |||| ||| | | | | | | || | ||| || ||||| || || Sbjct 78893 GGCCACTGTTTCCGATCATCGGTTACCGC-CGGATCGTCAAATCGTCGGCCAATCAACCG 78835 Query 282682 TTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCC 282741 ||| |||||||| | ||||| | ||||| | || |||| | ||||||||||||||| Sbjct 78834 TTTGGCATCAAAGACGGTATTCGCAGGATTCATGGCCACTTGGTTTTTGGCTGCATCTCC 78775 Query 282742 AATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 282801 ||||| ||| || ||||| |||| ||||| || ||||| ||||| || || || Sbjct 78774 TATCAGTCTTTCCGTATCTGTGAATGCCACATAACTAGGTGTTGTTCGATTGCCCTGGTC 78715 Query 282802 ATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCC 282861 ||| ||||| || || |||||| |||| | ||| | || || ||||| || || Sbjct 78714 ATTGGCAATGATCTCCACTTTATTATTTGAGAAAACAGCCACGCAGGAGAAAGTAGTGCC 78655 Query 282862 TAAATCAATACCAATAGC 282879 || |||||||||||| || Sbjct 78654 TAGATCAATACCAATCGC 78637 >seq495 Length=264196 Score = 154 bits (170), Expect = 1e-31 Identities = 681/1062 (64%), Gaps = 26/1062 (2%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || ||| | || | |||||| | || || || ||||| | ||||||||| || ||||| Sbjct 106891 TTGTCAACTGCTGACACATTCAATATGCCGTTTGCATCAATATCAAATGTCACCTCAATC 106832 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 || || || || | |||| || || || || ||| | ||| | |||| ||| Sbjct 106831 TGTGGAACACCACGTGGAGCTGGAGGAATGCCCGACAACTCGAATTTCCCCAACAAATTG 106772 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || || ||| | || ||||||||| | | || || || | | ||| ||| Sbjct 106771 TTGTCACGAGTCATCGCACGCTCACCCTCGTACACCTGAATCAATACACCCGGTTGGTTA 106712 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAA-GGAATTGTTGTGTTTCTATCAAT 281655 || ||||| || || || |||| | | || | || || || || || | | || Sbjct 106711 TCCGAATACGTAGTGAACG-TCTGTGTCTGTTTCGTCGGGATCGTAGTATTCCGTTTGAT 106653 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA- 281714 | | |||||||| |||||| || || || || || | || | |||| ||||| | Sbjct 106652 CAAAGCGGTCATAACACCACCGGCCGTCTCCAATCCCAACGACAATGGAGCCACATCCAG 106593 Query 281715 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 281774 | | |||| || ||| | || | | | |||| | || || || |||| || Sbjct 106592 CAACAACAA-ATCTTGCACCGCCTCGTGCTTGTCACCACTCAATATGGCCGCCTGAACAG 106534 Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834 ||||||| || || ||||| || || ||||| | || | || | | ||| || |||| Sbjct 106533 CAGCACCGTAAGCCACAGCCTCGTCCGGATTGATAGACTTGTTCAACTCTTTCCCGTTGA 106474 Query 281835 AAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893 |||||| ||| || || || | ||||| |||||||||| ||| || || || || ||| Sbjct 106473 AAAAATCTTGCAACAACTTTTGC-ACCTTCGGAATACGAGTTGACCCGCCGACCAACACA 106415 Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953 || || || | ||| || |||| || | || | | |||| ||||| || || Sbjct 106414 ATATCGTGGATCTGATGCTTGTCCATCTTCGCGTCACGAAGAGCTTTCTCAACCGGCTCC 106355 Query 281954 AGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 282013 || | | | |||||||| | | | || || || ||| | ||||| || || Sbjct 106354 AGTGTACCACGGAACAAGTCCGCATTCAACTCCTCAAAACGAGCACGAGTAATAG--ACG 106297 Query 282014 T-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 282071 | || || ||||| ||||| |||| ||||| | || | | | |||| |||| Sbjct 106296 TGTAAAAGTCAATCCCTTCATACAATGAATCTATCTCCAAATTCGCCTGAGCACTAGAAC 106237 Query 282072 --ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA----AGGCTTTTG 282125 | ||||| |||| ||||| ||||| || || | || | || | | |||| | Sbjct 106236 TCAAAGTGC--GTTTCGCACGCTCACACGCAGTTCGAAGACGACGCACAGCACGCTTGTT 106179 Query 282126 CTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTAC 282183 | | |||| |||| | |||| || | |||||| |||| || | | ||| | || Sbjct 106178 ATCACTGAT----ATCTTTCTTATGCTTCCGCTTGAACTCTTGAATAAA--ATGACTCAC 106125 Query 282184 AAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTG 282243 | |||| | |||||||| ||||| ||||| | || | || | || | | | || | Sbjct 106124 CATACGACTGTCAAAATCCTCACCGCCCAAATGCGTGTCACCAGCAGTCGATTTCACCTC 106065 Query 282244 GAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAA 282303 ||||| ||||| |||| | ||| | | |||||| |||||||| |||| ||| || Sbjct 106064 GAAAATACCATCCTCAATGGTCAAGATCGAAACATCGAATGTTCCACCGCCCAAATCGAA 106005 Query 282304 AATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGC 282363 || | || | ||| | | || || || | ||||||||||| || ||||| Sbjct 106004 GATCAACACGTGGCGTTCACTCCCCACTTTCTTGTCCAAACCATACGCAATCGCGGCAGC 105945 Query 282364 AGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 282423 ||| || || || || || | || ||||| | || || || || | ||| || || Sbjct 105944 AGTCGGCTCGTTGATTATGCGTAACACATTCAATCCGGCTATCGCACCAGAATCCTTCGT 105885 Query 282424 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAAT 282465 || || | || || || ||||| ||||||||||| || Sbjct 105884 CGCCTGACGCTGACTGTCATTGAAATAGGCAGGAACAGTGAT 105843 Score = 149 bits (164), Expect = 5e-30 Identities = 487/748 (65%), Gaps = 14/748 (2%) Strand=Plus/Minus Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCA 282196 |||| | ||||| || | |||||| || | || | | ||| | || | |||| | ||| Sbjct 105577 ATCTTTCTTATACTTCCGCTTGAATTCCTGAATAAA--ATGACTCACCATACGACTGTCA 105520 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 ||||| ||||| ||||| | || | || | || | | || | ||||| ||||| Sbjct 105519 AAATCCTCACCGCCCAAATGCGTGTCACCAGCAGTCGACTTCACCTCGAAAACACCATCC 105460 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | ||| | | |||||| |||||||| |||| |||||| || | || | Sbjct 105459 TCAATGGTCAATATTGATACATCAAATGTTCCACCGCCCAAATCAAAGATCAACACGTGG 105400 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 ||| | | || || || | ||||||||||| || |||||||| || || || Sbjct 105399 CGTTCACTCCCCACTTTCTTGTCCAAACCATACGCAATCGCGGCAGCAGTCGGCTCGTTG 105340 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 || || | || ||||| | || || || || | ||| || || || || | || Sbjct 105339 ATTATGCGTAACACATTCAATCCGGCTATCGCACCAGAATCCTTCGTCGCCTGACGCTGA 105280 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 || || ||||| ||||||||||| || || |||||| | || ||||| || | ||| Sbjct 105279 CTGTCATTGAAATAGGCAGGAACAGTGATCACCGCATCTTTCACGTCTTTGCCTAGGTAA 105220 Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GAGAA- 282553 || || | | ||||| || | |||| ||| || || || | || | ||||| Sbjct 105219 GCAGCCGCAATCTCCTTCATCTTCGTCAAAACCATAGACGAGATCTCCTCAGCTGAGAAC 105160 Query 282554 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 282613 ||| ||| ||| ||| || || | | ||| | || || || Sbjct 105159 AATTTCTT---CTCACCCATATACTCCACGCGAATCTTCGCTTTGTCGCCGTCACGAACC 105103 Query 282614 ACTTTAAATGGCCAATATTTCATAT-CTGATTGAAC-ACTTTGGTCATTAAAATCTCTAC 282671 |||| || ||||| | ||| || || | | | || |||| ||| || | Sbjct 105102 ACTTCGAACGGCCAGTGCTTCCGATCCTCCGTCACCGAC--GCATCATCAAATCGTCGCC 105045 Query 282672 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGG 282731 | |||| ||||| ||||| || | ||||| || ||||| | || |||| | ||| | Sbjct 105044 CGATTAGGCGTTTCGCATCGAACACTGTATTTGTCGGATTCATGGCCACTTGGTTTTTTG 104985 Query 282732 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 | |||||||| ||||| |||| || || || || | ||||| || ||||| || | Sbjct 104984 CAGCATCTCCGATCAGTCGTTCCGTGTCCGTGAAAGCCACATAACTCGGTGTTGTTCGGT 104925 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 282851 | |||||||| |||||||| ||||| || ||||||| || | || |||||||| Sbjct 104924 TCCCTTGATCGTTCGCAATGATTTCCACCTTACCATGCTGGAACACTCCTACACAGGAGT 104865 Query 282852 AAGTTGTTCCTAAATCAATACCAATAGC 282879 | || ||||| ||||| || || ||||| Sbjct 104864 AGGTAGTTCCCAAATCGATTCCGATAGC 104837 Score = 138 bits (152), Expect = 8e-27 Identities = 487/755 (65%), Gaps = 28/755 (4%) Strand=Plus/Minus Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCA 282196 |||| | |||| || | |||||| |||| || | | ||| | || | |||| | ||| Sbjct 131195 ATCTTTCTTATGCTTCCGCTTGAACTCTTGAATAAA--ATGACTCACCATACGACTGTCA 131138 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 ||||| ||||| ||||| | || | || | || | | | || | ||||| ||||| Sbjct 131137 AAATCCTCACCGCCCAAATGCGTGTCACCAGCAGTCGATTTCACCTCGAAAATACCATCC 131078 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | ||| | | |||||| |||||||| |||| ||| || || | || | Sbjct 131077 TCAATGGTCAAGATCGAAACATCGAATGTTCCACCGCCCAAATCGAAGATCAACACGTGG 131018 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 ||| | | || || || | ||||||||||| || |||||||| || || || Sbjct 131017 CGTTCACTCCCCACTTTCTTGTCCAAACCATACGCAATCGCGGCAGCAGTCGGCTCGTTG 130958 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 || || | || ||||| | || || || || | ||| || || || || | || Sbjct 130957 ATTATGCGTAACACATTCAATCCGGCTATCGCACCAGAATCCTTCGTCGCCTGACGCTGA 130898 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 || || ||||| ||||||||||| || || |||||| | || ||||| || | ||| Sbjct 130897 CTGTCATTGAAATAGGCAGGAACAGTGATCACCGCATCTTTCACGTCTTTGCCCAGGTAA 130838 Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GAGAAT 282554 || | || | | ||||| || | |||| ||| || || || | || | ||||| Sbjct 130837 GCATTCGCAATCTCCTTCATCTTCGTCAAAACCATAGACGAGATCTCCTCAGCTGAGAAC 130778 Query 282555 ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTA----TTACCAACATTA 282610 || || |||| | | || || | || | | | ||| || Sbjct 130777 GTTTTCTG--TTCACCACGGAACTCAACGCGAATTTTCGGGACACCGTTCTCTGACACTA 130720 Query 282611 ATAACTTTAAATGGCCAATATTTCATATC-----TGATTGAA-CACTTTGGTCATTAAAA 282664 | | |||||||||| ||| ||| | | ||| || |||| ||| Sbjct 130719 ----CCTCGAATGGCCAATGCTTCCGATCCTCCGTCACCGAAGCA------TCATCAAAT 130670 Query 282665 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGA 282724 || || |||| ||||| ||||| || | ||||| || ||||| | || |||| Sbjct 130669 CGTCGTCCGATTAGGCGTTTCGCATCGAACACTGTATTTGTCGGATTCATGGCCACTTGG 130610 Query 282725 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 282784 | || || |||||||| ||||| ||||||| || || || | ||||| || ||| Sbjct 130609 TTCTTTGCAGCATCTCCGATCAGTCGTTCTGTGTCCGTGAAAGCCACATAACTCGGTGTT 130550 Query 282785 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACA 282844 || || || |||||||| |||||||| ||||| || ||||||| || | || |||||| Sbjct 130549 GTTCGGTTCCCTTGATCGTTCGCAATGATTTCCACCTTACCATGCTGGAACACTCCTACA 130490 Query 282845 CAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 || | || ||||||||||| || || ||||| Sbjct 130489 CAGGAGTAGGTAGTTCCTAAATCGATTCCGATAGC 130455 Score = 132 bits (146), Expect = 4e-25 Identities = 485/751 (65%), Gaps = 20/751 (3%) Strand=Plus/Minus Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCA 282196 |||| | |||| || | |||||| |||| || | | ||| | || | |||| | ||| Sbjct 160377 ATCTTTCTTATGCTTCCGCTTGAACTCTTGAATAAA--ATGACTCACCATACGACTGTCA 160320 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 ||||| ||||| ||||| | || | || | || | | | || | ||||| ||||| Sbjct 160319 AAATCCTCACCGCCCAAATGCGTGTCACCAGCAGTCGATTTCACCTCGAAAATACCATCC 160260 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | ||| | | |||||| |||||||| |||| ||| || || | || | Sbjct 160259 TCAATGGTCAAGATCGAAACATCGAATGTTCCACCGCCCAAATCGAAGATCAACACGTGG 160200 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 ||| | | || || || | ||||||||||| || |||||||| || || || Sbjct 160199 CGTTCACTCCCCACTTTCTTGTCCAAACCATACGCAATCGCGGCAGCAGTCGGCTCGTTG 160140 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 || || | || ||||| | || || || || | ||| || || || || | || Sbjct 160139 ATTATGCGTAACACATTCAATCCGGCTATCGCACCAGAATCCTTCGTCGCCTGACGCTGA 160080 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 || || ||||| ||||||||||| || || |||||| | || ||||| || | ||| Sbjct 160079 CTGTCATTGAAATAGGCAGGAACAGTGATCACCGCATCTTTCACGTCTTTGCCCAGGTAA 160020 Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GAGAAT 282554 || | || | | ||||| || | |||| ||| || || || | || | ||||| Sbjct 160019 GCATTCGCAATCTCCTTCATCTTCATCAAAACCATAGACGAGATCTCCTCAGCTGAGAAC 159960 Query 282555 ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTA----TTACCAACATTA 282610 || || |||| | | || || | ||| | | | ||| | Sbjct 159959 GTT--TTCTGTTCACCACGGAACTCAACGCGAATTTTTGGGACACCGTTCTCTGACACT- 159903 Query 282611 ATAACTTTAAATGGCCAATATTTCATAT-CTGATTGAAC-ACTTTGGTCATTAAAATCTC 282668 || | |||||||||| ||| || || | | | || | |||| ||| || Sbjct 159902 ---ACCTCGAATGGCCAATGCTTCCGATCCTCCGTCACCGACGT--ATCATCAAATCGTC 159848 Query 282669 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATT 282728 || |||| ||||| ||||| || | ||||| || ||||| | || |||| | | Sbjct 159847 GTCCGATTAGGCGTTTCGCATCGAACACTGTATTTGTCGGATTCATGGCCACTTGGTTCT 159788 Query 282729 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 282788 | || |||||||| ||||| |||| || || || || | ||||| || || || | Sbjct 159787 TTGCAGCATCTCCGATCAGTCGTTCCGTGTCCGTGAAAGCCACATAACTCGGTGTGGTTC 159728 Query 282789 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 282848 | || |||||||| |||||||| ||||| || ||||||| || | || |||||||| Sbjct 159727 GGTTCCCTTGATCGTTCGCAATGATTTCCACCTTACCATGCTGGAACACTCCTACACAGG 159668 Query 282849 TAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || ||||| ||||| || || ||||| Sbjct 159667 AGTAGGTAGTTCCCAAATCGATTCCGATAGC 159637 >seq9461 Length=15317 Score = 143 bits (158), Expect = 2e-28 Identities = 487/748 (65%), Gaps = 17/748 (2%) Strand=Plus/Plus Query 281759 ATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTT 281818 || || || |||| ||||||||| || || ||||| || || ||||| | || | || Sbjct 10685 ATGGCCGCCTGAACAGCAGCACCGTAAGCCACAGCCTCCTCCGGATTGATAGACTTGTTC 10744 Query 281819 AGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGAT 281878 | | ||| || |||||||| ||| | || || | ||||| |||||||||| ||| Sbjct 10745 AACTCTTTCCCGTTGAAAAAGCTTGCGACAACTTTTGC-ACCTTCGGAATACGAGTTGAC 10803 Query 281879 CCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACT 281938 || || || || ||||| || || | ||| || |||| || | || | | || Sbjct 10804 CCGCCGACCAACACAATATCGTGGATCTGATGCTTGTCCATCTTCGCGTCACGAAGAGCT 10863 Query 281939 TTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCT 281998 |||||||| || || || | | | |||||||| | | | || || || ||| Sbjct 10864 TTTTCAACCGGCTCCAGTGTACCACGGAACAAGTCCGCATTCAACTCCTCAAAACGAGCA 10923 Query 281999 CTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAG 282056 | ||||| || || | || || ||||| ||| | |||| ||||||| || | | Sbjct 10924 CGAGTAATAG--ACGTGTAAAAGTCAATCCCTCCATACAATGAATCAATCTCCAAATTCA 10981 Query 282057 TTTGAGTCGAAGAAG--ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCG 282114 |||| |||| | ||||| |||| ||||| ||||| || || | || | | Sbjct 10982 CCTGAGCACTAGAACTCAAAGTGC--GTTTCGCACGCTCACACGCAGTTCGAAGACGACA 11039 Query 282115 TAAGGCTT--TTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACA 282172 | || | ||| | || | | | |||| | |||| || | |||||| | || || | Sbjct 11040 CACAGCATGCTTGTT--TTCACTGATATCTTTCTTATGCTTCCGCTTGAACTTTTGAATA 11097 Query 282173 CACCATG--TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACG 282230 | ||| | || | |||| | || ||||| ||||| ||||| | || | || | | Sbjct 11098 AA--ATGACTCACCATACGACTGTCCAAATCCTCACCGCCCAAATGCGTGTCACCAGCGG 11155 Query 282231 TAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCAC 282290 | | | | || | ||||| ||||| ||| | ||| | | |||||| || |||| Sbjct 11156 TCGATTTCACCTCGAAAATACCATCCTCAGTGGTCAAGATCGAAACATCGAATGTCCCAC 11215 Query 282291 CACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACG 282350 | |||| ||| ||||| | ||| | ||| | || || || || | |||||||| Sbjct 11216 CGCCCAAATCGAAAATCAATACGTGGCGTTCACTCCCTAATTTCTTGTCCAAACCATACG 11275 Query 282351 CAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTC 282410 ||| || |||||||| || || || || || | || ||||| | || || || | Sbjct 11276 CAATCGCGGCAGCAGTCGGCTCGTTGATTATGCGTAACACATTCAATCCGGCTATCGCAC 11335 Query 282411 CTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGG 282470 | | ||| || || || || | || || || ||||| ||||||||||| || || | Sbjct 11336 CAGAATCCTTCGTCGCCTGACGCTGACTGTCATTGAAATAGGCAGGAACAGTGATCACCG 11395 Query 282471 CATCTGTTACTTCTTTTCCAATATAAGC 282498 ||||| | || ||||| || | ||||| Sbjct 11396 CATCTTTCACATCTTTGCCCAGGTAAGC 11423 >seq53 Length=770668 Score = 91.5 bits (100), Expect = 1e-12 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 || |||| ||||| ||||| || | |||||| || ||||| || |||||| || Sbjct 140727 CCGATTAGGCGTTTCGCATCGAACACAGTATTCGTCGGATTCCTGGCGACTTGATTCTTT 140668 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || |||| | | ||||| |||||| || || || | |||| || || || || Sbjct 140667 GCAGCATTTTCGATCAGTCGTTCTGCTTCCGTGAAAGCCACATTACTCGGTGTGGTTCGG 140608 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 || |||||||| |||||||| ||||| || || |||| ||| | || |||| | || Sbjct 140607 TTCCCTTGATCGTTCGCAATGATTTCCACCTTGCCATGTTGGAACACTCCTAAAAAAGGG 140548 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAG 282878 | || ||||||||||| || | |||| Sbjct 140547 TAGGTAGTTCCTAAATCGATTCAGATAG 140520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739640727387708