Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2168 104 7e-17 >seq2168 Length=109785 Score = 104 bits (114), Expect = 7e-17 Identities = 115/152 (76%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 443710 GACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATC 443769 |||| || |||| ||||| |||||||||| | || || ||| || ||| || | ||| Sbjct 2673 GACTTGTGGCTTATGCTGCGGTCGAAGGAGTTTTCTTCTCCGGGAGTTTT-GCTGCAATC 2731 Query 443770 TTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGT 443829 |||||| | || ||||| ||||| |||| ||||| || |||||||| || || || | | Sbjct 2732 TTCTGGCTTAAGAAGCGGGGACTGATGCCAGGTCTAACATTTAGTAATGAGCTAATAACT 2791 Query 443830 CGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 ||||||||||| | ||| ||||| ||||| Sbjct 2792 CGGGACGAGGGCCTACATACGGACTTTGCCTG 2823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587925773512310