Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq393 105 8e-18 >seq393 Length=352657 Score = 105 bits (116), Expect = 8e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 179956 TTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACT 180015 || || || || ||||| |||||||||| ||| |||||||| ||| ||||||||| ||| Sbjct 19852 TTGCCCCGTAGTGGGAAAACACCGTAGTTATCCCGACCAACAACACCGAGACCAGCTACT 19793 Query 180016 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCC 180075 || |||| || || || || ||||| || | |||||||||||| || | | Sbjct 19792 GCCAGGGATTTGGCTGAGTCTCCCTCGGTAAGGATGAGCGTACAAGAAGATGAGTTTTTG 19733 Query 180076 GTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAATACC 180113 || ||||| ||||| || ||||||||||| || || || Sbjct 19732 GTGCCTGCATTGTTTGCATCGTCCAACTTAGGTATGCC 19695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618279369790480