Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq2038 87.8 1e-12 >seq2038 Length=246823 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 118480 TGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCT 118539 |||||| ||||| ||| |||||||| |||||||| | |||||||| ||| | || || Sbjct 141764 TGATTCGAATAGATATGTGCATCCCCCATTGTATGCACAAATTCACCCGGTTTCAGTCCC 141823 Query 118540 GTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCC 118599 ||||| || |||||||||||||| | | ||||| || | || || ||||| ||| Sbjct 141824 GTCAGATGGGCAATCATGTATGTAAGTAGTGCATAGCTAGCAATGTTGAACGGAACGCCC 141883 Query 118600 AGACCC 118605 | |||| Sbjct 141884 AAACCC 141889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414374973153112