Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq6555 141 2e-28 seq109119 134 3e-26 >seq6555 Length=1530 Score = 141 bits (156), Expect = 2e-28 Identities = 218/306 (71%), Gaps = 4/306 (1%) Strand=Plus/Plus Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGT 51944 ||| || || || | |||| ||| |||||||| || || |||| |||| || | Sbjct 132 GATCGCAAGTGCCCTGTGGTGGTATTATATATCGAAGCTCATTGAATTTATGGACACTTT 191 Query 51945 ATTTTTCATACTTAGGAAAAA-ATTTAATCAGGTTAGTTTTCTACACGTATATCATCATT 52003 || || || ||| | ||||| | || | ||| | | | ||||| || |||||||| | Sbjct 192 CTTCTTTATCCTTCGTAAAAAGAATTCA-CAGATATCTATCCTACATGTGTATCATCACT 250 Query 52004 TTACTATGTTTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCAGGCATTTT 52063 |||| ||||| || || | ||||| || |||| ||| ||||||| ||||| | |||| Sbjct 251 TTACAATGTTCCCTATATGGTGGATTGGAGTTAAGTGGGTTGCTGGTGGTCAATCTTTTT 310 Query 52064 TTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGTATGGCCG 52123 ||||||| | | ||| |||||| ||| || | ||||| ||||||||||| ||||| | Sbjct 311 TTGGAGCGATGATGAATAGTTTTATACATATTTTAATGTATACTTATTATGGAATGGCTG 370 Query 52124 CTTGTGGTCCTATGT-TCAGAAAGTATCTATGGTGGAAACGTTATCTTACTATAATGCAG 52182 | ||| | | ||| ||| ||||| |||||||||||||| | |||| | |||| Sbjct 371 GTCTTGGAGAAAAATATCA-AAAATATCTGTGGTGGAAACGTTACTTGACTAAACTGCAA 429 Query 52183 TTGGTA 52188 ||||| Sbjct 430 CTGGTA 435 >seq109119 Length=3051 Score = 134 bits (148), Expect = 3e-26 Identities = 208/294 (71%), Gaps = 5/294 (2%) Strand=Plus/Minus Query 189419 CAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTG 189478 ||| | || |||| |||| |||||| ||||||| || | ||| |||||||||| Sbjct 1656 CAATTAGACAAAGGAAAAACACATGATAAGTTATGGAATGCTGCTCAATTGCAGATGGTT 1597 Query 189479 AGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGG 189538 | ||| || |||||||| | ||| || ||||||||||||| ||||| ||| | |||||| Sbjct 1596 AAAGAGGGTAAAATGCACGGATTTCTAAGAATGTATTGGGCGAAGAAAATATTAGAATGG 1537 Query 189539 ACTAG---AACACCTGAAGACGCTTTGAGTTATAGTATCTATTTGAACAACAAGTACGAA 189595 || || | || ||||| ||||||| | |||| |||| | | |||| Sbjct 1536 ACAAGTGAAGGTCCAGAAGAAGCTTTGAAAAGAACAATCTTGCTGAATGATAGGTACAGT 1477 Query 189596 CTAGACGGCACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACA 189654 | ||||| ||| ||||| ||||||||| || |||||||| || || ||| |||| Sbjct 1476 ATTGACGG-ACGCGATCCAAACGGATACACTGGGATCATGTGGTCCATATGTGGAGTACA 1418 Query 189655 CGATAGAGCGTGGAAAGAAAGACCGATATTTGGAAAGATAAGATATATGAATTA 189708 ||| || ||||||||| ||| | || || ||| | ||||||||||||| Sbjct 1417 TGATCAAGGGTGGAAAGAGAGAGACGTGTTCGGTAAGGTGCGATATATGAATTA 1364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920251179050160