Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq211385 116 3e-21 seq12314 116 3e-21 seq247245 107 2e-18 seq166687 104 2e-17 seq153922 98.7 9e-16 seq114143 98.7 9e-16 seq207016 91.5 1e-13 seq246644 89.7 5e-13 seq236677 89.7 5e-13 seq217494 89.7 5e-13 seq130724 89.7 5e-13 >seq211385 Length=3642 Score = 116 bits (128), Expect = 3e-21 Identities = 192/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 11920 ATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTC 11979 ||||||||||||||||||||||||||| |||||||| || | || ||| | ||| || Sbjct 2044 ATACATTTCTGAATGAATATTTTCCATTGCTATTTGGAAACTGTAAAAAGCTTCTGCTTC 1985 Query 11980 TGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACT 12039 | | ||| || ||||||||| || ||||| ||||| || || |||||||| Sbjct 1984 CGGCATTTTTACTTCTTTCAGAAATCTTTCTGCCAAATTTTCATTAACTATTCCATCACT 1925 Query 12040 AGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATC 12099 | ||| ||||| || || | ||| || || | || ||| || |||| | | Sbjct 1924 GGCTGCGAAAAAGGCAAGGACATGCGAAATGAAATGTTGTTCTTCCGGTTTTAAGTCGTT 1865 Query 12100 CCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGA 12159 | ||||| |||||| || |||| || ||||||||| |||||||| | | | Sbjct 1864 C----CATCT--ATCTTTCGACAAATTTATTTCTTCAACTGTCCAAAAGGAATCAAGAGC 1811 Query 12160 TTGTTTATACATTTTCCAGATATCATGATACTTAAT 12195 ||||||||||||| ||||||| | ||||| || Sbjct 1810 GTGTTTATACATTTGAAAGATATCCGGGTACTTTAT 1775 >seq12314 Length=2576 Score = 116 bits (128), Expect = 3e-21 Identities = 192/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 11920 ATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTC 11979 ||||||||||||||||||||||||||| |||||||| || | || ||| | ||| || Sbjct 1599 ATACATTTCTGAATGAATATTTTCCATTGCTATTTGGAAACTGTAAAAAGCTTCTGCTTC 1658 Query 11980 TGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACT 12039 | | ||| || ||||||||| || ||||| ||||| || || |||||||| Sbjct 1659 CGGCATTTTTACTTCTTTCAGAAATCTTTCTGCCAAATTTTCATTAACTATTCCATCACT 1718 Query 12040 AGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATC 12099 | ||| ||||| || || | ||| || || | || ||| || |||| | | Sbjct 1719 GGCTGCGAAAAAGGCAAGGACATGCGAAATGAAATGTTGTTCTTCCGGTTTTAAGTCGTT 1778 Query 12100 CCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGA 12159 | ||||| |||||| || |||| || ||||||||| |||||||| | | | Sbjct 1779 C----CATCT--ATCTTTCGACAAATTTATTTCTTCAACTGTCCAAAAGGAATCAAGAGC 1832 Query 12160 TTGTTTATACATTTTCCAGATATCATGATACTTAAT 12195 ||||||||||||| ||||||| | ||||| || Sbjct 1833 GTGTTTATACATTTGAAAGATATCCGGGTACTTTAT 1868 >seq247245 Length=18620 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 38299 ATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCT 38358 |||||||| |||| ||| || || | | || | || | |||||| ||||| ||||| Sbjct 17606 ATTCCACCGGCATATTTGGAAATGATACTACAGTCCTTAACCGTATCGAATATTCCTTCG 17665 Query 38359 ATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCG 38418 ||||||||||| || |||| || | ||||| || || | ||||| ||| ||||| Sbjct 17666 ATACTGTCATCTTTGATTGTCAGCAAGAAACAGCTCGAGAATTGAGCTAATCTTGTTCCA 17725 Query 38419 GCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGT 38477 | |||||| | ||| ||||| || || |||||||| || ||||||| ||| ||||| Sbjct 17726 GAGTTAAAAAGTGTTGGAGACGCGTGAATGAACCACTTCTCCGACATCATATTGTATGT 17784 >seq166687 Length=11573 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 38296 CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCT 38355 || |||||||| |||| ||| || || | | || | || | ||| || ||||| ||| Sbjct 10115 CCGATTCCACCCGCATATTTGGAGATGATACTACAGTCCTTAACCGTTTCGAATATTCCT 10174 Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTT 38415 || ||||||||||| || |||| || | ||||| || || | ||||| ||| ||| Sbjct 10175 TCGATACTGTCATCTTTGATTGTCAGCAAGAAACAGCTCGAGAATTGAGCTAATCTTGTT 10234 Query 38416 CCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATAT 38475 || | |||||| | ||| ||||| || || ||||||||||| || |||| ||| ||| Sbjct 10235 CCAGAGTTAAAAAGTGTTGGAGACGCGTGAATGAACCATTTCTCTGACATCATATTGTAT 10294 Query 38476 GT 38477 || Sbjct 10295 GT 10296 >seq153922 Length=2492 Score = 98.7 bits (108), Expect = 9e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 38296 CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCT 38355 || |||||||| |||| ||| || || | | || | | | |||||| |||| ||| Sbjct 1474 CCGATTCCACCGGCATATTTGGAGATGATACTACAGTCCCTAACCGTATCGTATATTCCT 1533 Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTT 38415 || ||||||||||| || |||| || | ||||| || || | |||||| ||| || Sbjct 1534 TCGATACTGTCATCTTTGATTGTCAGCAAGAAACAGCTCGAGAGTTGAGGTAATCTTGTG 1593 Query 38416 CCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACA 38464 || ||||| || | ||| ||||| || || ||||||||||| || |||| Sbjct 1594 CCAGCGTTGAACAGTGTCGGAGACGCGTGAATGAACCATTTCTCTGACA 1642 >seq114143 Length=1127 Score = 98.7 bits (108), Expect = 9e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 38296 CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCT 38355 || |||||||| |||| ||| || || | | || | | | |||||| |||| ||| Sbjct 109 CCGATTCCACCAGCATATTTGGAGATGATACTACAGTCCCTAACCGTATCGTATATTCCT 168 Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTT 38415 || ||||||||||| || |||| || | ||||| || || | ||||| ||| || Sbjct 169 TCGATACTGTCATCTTTGATTGTCAGCAAGAAACAGCTCGAGAGTTGAGCTAATCTTGTG 228 Query 38416 CCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACA 38464 || ||||| || | ||| ||||| ||||| ||||||||||| || |||| Sbjct 229 CCAGCGTTGAACAGTGTCGGAGACGCATGAATGAACCATTTCTCTGACA 277 >seq207016 Length=9131 Score = 91.5 bits (100), Expect = 1e-13 Identities = 474/744 (64%), Gaps = 20/744 (3%) Strand=Plus/Minus Query 37744 ATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTT-TGATTGGATTT 37802 |||||||| || ||||||||||| | | || || |||| | ||| ||||||||||| Sbjct 6102 ATAATCTCCGTGCAGAGATTACTGCACTTGATGGTGCCCAGGT-GCTGGTGATTGGATTT 6044 Query 37803 TTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGAT 37862 |||||||| || || || || || || || ||| ||| || || | |||| Sbjct 6043 CGCGTTACAAGAGTCCTTGTAGAGCATGTATGGTACTCCCGTTTCAATCTGMGAGTCGAG 5984 Query 37863 AATAGATTTCCATAAACTTCTTGCTTTAACGATC--GCTTTAAtttttttCTTTGTT-TC 37919 ||| |||| ||| | | ||| || | ||| ||| | || | | | || Sbjct 5983 AATCGATTGCCAGAGGCGTCTCGC---AGGCATCTTGCTCGAGCCCTTGCCCTCTTGCTC 5927 Query 37920 GTA-TTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATT 37978 ||| |||| ||| || | || || | ||||| || |||| || ||||| | Sbjct 5926 GTACTTCTC-ATACAACTGCCGGAATTCCTCGCCCCAGCAGTCCGATAACCCGGGACACT 5868 Query 37979 CGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAG 38038 | ||| ||| || | ||| || ||| ||| || || || ||||| || | ||| | Sbjct 5867 TGTGAGGATCCATCAGCGTCCACTCGCCATTTTTCTCCACTCGCTCCATGAACAGATCCG 5808 Query 38039 GTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCC--CTACAT--TC 38094 | | ||| || ||||| |||| || || | ||||||| | | || ||| | Sbjct 5807 GGATCCACAAAGCAGTGAATATGTCGC--GTGCC---TTCTTCGATTCATCTCCATGATT 5753 Query 38095 TTTCTTAAGCTT-AGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACAT 38153 |||||| || | ||||| ||| || || | |||||| || || || || || | | Sbjct 5752 TTTCTTGAGATCGAGAAACTCGCCAATGTCCGGGTGCCACGGCTCGATGTACATGGCAAA 5693 Query 38154 TGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCT 38213 || || || | || | |||||||| | || |||| | || ||| | || Sbjct 5692 AGCACCAGGCCGCTTGTTTCCTCCCTGGTCAACGTATCGCGCGACGTAATTGAACATCTG 5633 Query 38214 TAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGC 38273 | ||| || | ||| ||||| | ||||| | |||| || ||| || | | Sbjct 5632 GATCATTGGAGTGAGACCGTTAGAGGTTCCGTTCGTCCCGGCAATTGGAGTGCCAGTCGA 5573 Query 38274 TCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTG 38333 || ||| | ||| | || |||||||| ||||||||||| || | | || | Sbjct 5572 CCGAATACTGTGTATATTGAGACCGATTCCACCGGCATGTTTTGAGATGATACTACAGTC 5513 Query 38334 TTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACT 38393 || | || |||||||| ||||| || ||| |||| |||| | | ||||| || Sbjct 5512 CTTCACTGTGTCAAATATTCCTTCGATGGAGTCGCCCTTGATTGTCAACAAGAAACAGCT 5453 Query 38394 AGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCA 38453 || | ||||| ||| |||| |||||||| | ||| ||||| || || |||||||| Sbjct 5452 TGAGAGTTGAGCGAATCTTTTTCCTGCGTTAAAAAGTGTTGGAGAAGCGTGAATGAACCA 5393 Query 38454 TTTTTCCGACAAATAATTATATGT 38477 || || |||| ||| ||||| Sbjct 5392 CTTCTCTGACATCAGATTGTATGT 5369 >seq246644 Length=20408 Score = 89.7 bits (98), Expect = 5e-13 Identities = 125/174 (72%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 38296 CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCT 38355 || |||||||| |||| ||| || || | | || | || | ||||| ||||| ||| Sbjct 11680 CCGATTCCACCGGCATATTTGGAGATGATACTACAGTCCTTAACCGTATAGAATATTCCT 11621 Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTT 38415 || ||||||||||| || | || || | ||||| || || | ||||| ||| ||| Sbjct 11620 TCGATACTGTCATCTTTGAGTGTCAGCAAGAAACAGCTCGAGAATTGAGCTAATCTTGTT 11561 Query 38416 CCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACA-AATA 38468 || | |||||| | ||| | ||| || || ||||||||||| | |||| |||| Sbjct 11560 CCAGAGTTAAAAAGTGTTGTAGACGCGTGAATGAACCATTTCTTTGACATAATA 11507 >seq236677 Length=19943 Score = 89.7 bits (98), Expect = 5e-13 Identities = 334/519 (64%), Gaps = 10/519 (2%) Strand=Plus/Minus Query 37964 ATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTT 38023 |||| || ||||| | | ||| ||| || | ||| || ||| ||| || || || | Sbjct 19834 ATAACCCGGGACACTTGTGAGGATCCATCAGCGTCCACTCGCCATTTTTCTCCACTCGCT 19775 Query 38024 CCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGT 38083 |||| || | ||| || | ||| || ||||| |||| || || | ||||||| Sbjct 19774 CCATGAACAGATCCGGGATCCACAAAGCAGTGAATATGTCGC--GTGCC---TTCTTCGA 19720 Query 38084 TCC--CTACAT--TCTTTCTTAAGCTT-AGAAAATCGAATATATCAGCGTGCCATGGTTC 38138 | | || ||| | |||||| || | ||||| ||| || || | |||||| || || Sbjct 19719 TTCATCTCCATGATTTTTCTTGAGATCGAGAAACTCGCCAATGTCCGGGTGCCACGGCTC 19660 Query 38139 TATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGT 38198 || || || | | || || || | || | |||||||| | || |||| | Sbjct 19659 GATGTACATGGCAAAAGCACCAGGCCGCTTGTTTCCTCCCTGGTCAACGTATCGCGCGAC 19600 Query 38199 GTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATAT 38258 || ||| | || | ||| || | ||| ||||| | ||||| | |||| || Sbjct 19599 GTAATTGAACATCTGGATCATTGGAGTGAGACCGTTAGAGGTTCCGTTCGTCCCGGCAAT 19540 Query 38259 ATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGA 38318 ||| || | | || ||| | ||| | || |||||||| ||||||||||| Sbjct 19539 TGGAGTGCCAGTCGACCGAATACTGTGTATATTGAGACCGATTCCACCGGCATGTTTTGA 19480 Query 38319 TATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGG 38378 || | | || | || | || |||||||| ||||| || ||| |||| |||| Sbjct 19479 GATGATACTACAGTCCTTCACTGTGTCAAATATTCCTTCGATGGAGTCGCCCTTGATTGT 19420 Query 38379 TAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGA 38438 | | ||||| || || | ||||| ||| |||| |||||||| | ||| ||||| Sbjct 19419 CAACAAGAAACAGCTTGAGAGTTGAGCGAATCTTTTTCCTGCGTTAAAAAGTGTTGGAGA 19360 Query 38439 TGCATGTATGAACCATTTTTCCGACAAATAATTATATGT 38477 || || |||||||| || || |||| ||| ||||| Sbjct 19359 AGCGTGAATGAACCACTTCTCTGACATCAGATTGTATGT 19321 >seq217494 Length=14875 Score = 89.7 bits (98), Expect = 5e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671 |||| ||||||||| || || || || ||||| || | || |||||||| || || || Sbjct 7256 AAATATTTAAACATCAAGCAAGCGAAGTCACAGTGGAGGCCCTCGTCTCTGCTGATCAGC 7197 Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731 ||||| || | || ||||||||||| ||||| || | ||||||||| | || Sbjct 7196 TCATTGCTGAAGCAAAGACCTGGCATCAATCCGCGTTTCTTCAGCCAAAATATTGAGGCG 7137 Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTC 11780 || ||| ||||| || || ||||| || ||||| || ||||||| Sbjct 7136 AAGCTGCCACTGAAGAAGATCCCTTCCACGGCAGCAAAAGCAACTACTC 7088 >seq130724 Length=3734 Score = 89.7 bits (98), Expect = 5e-13 Identities = 334/519 (64%), Gaps = 10/519 (2%) Strand=Plus/Plus Query 37964 ATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTT 38023 |||| || ||||| | | ||| ||| || | ||| || ||| ||| || || || | Sbjct 110 ATAACCCGGGACACTTGTGAGGATCCATCAGCGTCCACTCGCCATTTTTCTCCACTCGCT 169 Query 38024 CCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGT 38083 |||| || | ||| || | ||| || ||||| |||| || || | ||||||| Sbjct 170 CCATGAACAGATCCGGGATCCACAAAGCAGTGAATATGTCGC--GTGCC---TTCTTCGA 224 Query 38084 TCC--CTACAT--TCTTTCTTAAGCTT-AGAAAATCGAATATATCAGCGTGCCATGGTTC 38138 | | || ||| | |||||| || | ||||| ||| || || | |||||| || || Sbjct 225 TTCATCTCCATGATTTTTCTTGAGATCGAGAAACTCGCCAATGTCCGGGTGCCACGGCTC 284 Query 38139 TATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGT 38198 || || || | | || || || | || | |||||||| | || |||| | Sbjct 285 GATGTACATGGCAAAAGCACCAGGCCGCTTGTTTCCTCCCTGGTCAACGTATCGCGCGAC 344 Query 38199 GTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATAT 38258 || ||| | || | ||| || | ||| ||||| | ||||| | |||| || Sbjct 345 GTAATTGAACATCTGGATCATTGGAGTGAGACCGTTAGAGGTTCCGTTCGTCCCGGCAAT 404 Query 38259 ATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGA 38318 ||| || | | || ||| | ||| | || |||||||| ||||||||||| Sbjct 405 TGGAGTGCCAGTCGACCGAATACTGTGTATATTGAGACCGATTCCACCGGCATGTTTTGA 464 Query 38319 TATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGG 38378 || | | || | || | || |||||||| ||||| || ||| |||| |||| Sbjct 465 GATGATACTACAGTCCTTCACTGTGTCAAATATTCCTTCGATGGAGTCGCCCTTGATTGT 524 Query 38379 TAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGA 38438 | | ||||| || || | ||||| ||| |||| |||||||| | ||| ||||| Sbjct 525 CAACAAGAAACAGCTTGAGAGTTGAGCGAATCTTTTTCCTGCGTTAAAAAGTGTTGGAGA 584 Query 38439 TGCATGTATGAACCATTTTTCCGACAAATAATTATATGT 38477 || || |||||||| || || |||| ||| ||||| Sbjct 585 AGCGTGAATGAACCACTTCTCTGACATCAGATTGTATGT 623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467029889633760