Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq12314 120 4e-22 seq153922 105 1e-17 seq246644 96.9 5e-15 seq213618 95.1 2e-14 seq211385 95.1 2e-14 seq166687 95.1 2e-14 seq101120 95.1 2e-14 seq247245 91.5 2e-13 seq201504 89.7 8e-13 >seq12314 Length=2576 Score = 120 bits (132), Expect = 4e-22 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 125337 AACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATC 125396 |||||||| | || | |||| | | ||| |||||| |||||| | |||| |||||| Sbjct 1493 AACGCAATACAAACTCTACCGTGTGTCACTAAGAAGGCTGAATGGGCGCTTCGATGGATC 1434 Query 125397 GATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATC 125456 || || | | || ||| ||| || || | || || || || || || || ||| Sbjct 1433 GAAGATCAAGACTCAACGTTTGCCTTACGAGTGATAGCGTTTGCGGCTGTCGAAGGGATC 1374 Query 125457 TTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGA 125516 || ||| ||||||||||| | ||||| ||| | ||||||||||| | ||||| ||| Sbjct 1373 TTTTTTAGTGGTAGTTTTGCATCTATCTTCTGGTTGAAGAAGCGCGGTGTAATGCCTGGA 1314 Query 125517 CTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 || |||||| ||||| || |||||||||||| | |||||||||||||| Sbjct 1313 TTGTGCTTCAGTAATGAGTTGATCAGTCGAGACGAGGGGATGCACTGTGACTTTGC 1258 >seq153922 Length=2492 Score = 105 bits (116), Expect = 1e-17 Identities = 131/177 (74%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 97203 CAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGC-AA 97261 ||| | ||||| ||| |||||||| ||||||||||| | ||| | ||| | | | || Sbjct 1034 CAGATCGAGACGGGAGTGCCGTACATGCTCTACAAGGACTC-GTGCAACGCGAAATCCAA 976 Query 97262 CCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGC 97321 || | ||| |||||||||||||| || ||||||||||||||| || || |||||| Sbjct 975 TCACCAGCACCTGGGCACCATCAAGTGCAGCAATCTGTGCACGGAGATCGTCGAGTACAG 916 Query 97322 CTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGT 97378 | | || ||||||| || ||||| |||||| ||| | ||| ||||| || || Sbjct 915 CGCACCTGACGAGATCGCCGTTTGTAATCTGGCCTCGATTTCTCTACCCAAATTCGT 859 >seq246644 Length=20408 Score = 96.9 bits (106), Expect = 5e-15 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 97203 CAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGC-AA 97261 ||| | || || |||| | ||||| ||||||||||| | ||| | ||||| | | || Sbjct 12231 CAGATCGAAACGGGAATGTCATACATGCTCTACAAGGACTC-GTGCAACGCAAAATCCAA 12289 Query 97262 CCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGC 97321 || | ||| |||||||||||||| || ||||||||||||||| || || |||||| Sbjct 12290 TCACCAGCACCTGGGCACCATCAAGTGCAGCAATCTGTGCACGGAGATCGTCGAGTACAG 12349 Query 97322 CTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGT 97378 | | || ||||||| || ||||| ||| || ||| | ||| ||||| || || Sbjct 12350 CGCACCTGACGAGATCGCCGTTTGTAATCTTGCCTCGATTTCTCTACCCAAATTCGT 12406 >seq213618 Length=17143 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || || || || || ||||| ||| ||||||||||| | ||||| ||| | Sbjct 1 GCGTTTGCGGCTGTCGAAGGGATCTTTTTTAGTGGTAGTTTTGCATCTATCTTCTGGTTG 60 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| | ||||| ||| || |||||| ||||| || |||||||||| Sbjct 61 AAGAAGCGCGGTGTAATGCCTGGATTGTGCTTCAGTAATGAGTTGATCAGTCGAGACGAG 120 Query 125553 GGCCTACACTGTGACTTTGC 125572 || | |||||||||||||| Sbjct 121 GGGATGCACTGTGACTTTGC 140 >seq211385 Length=3642 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || || || || || ||||| ||| ||||||||||| | ||||| ||| | Sbjct 2246 GCGTTTGCGGCTGTCGAAGGGATCTTTTTTAGTGGTAGTTTTGCATCTATCTTCTGGTTG 2305 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| | ||||| ||| || |||||| ||||| || |||||||||| Sbjct 2306 AAGAAGCGCGGTGTAATGCCTGGATTGTGCTTCAGTAATGAGTTGATCAGTCGAGACGAG 2365 Query 125553 GGCCTACACTGTGACTTTGC 125572 || | |||||||||||||| Sbjct 2366 GGGATGCACTGTGACTTTGC 2385 >seq166687 Length=11573 Score = 95.1 bits (104), Expect = 2e-14 Identities = 357/549 (65%), Gaps = 11/549 (2%) Strand=Plus/Minus Query 96834 CCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAACGG 96893 |||||| || |||| |||| | | ||||||| || | || || |||| ||| Sbjct 10041 CCAATGATCCAGATGTTCAATCAAGTCGCACGATATGTAAGCCAAGGGGGCAG---ACGT 9985 Query 96894 CCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAG 96953 || || || || || ||||| | ||||| |||||| | || || || ||| |||| Sbjct 9984 CCTGGTGCGATTGCAATCTACATCGAACCGTGGCACCCTGATATTGGCGAATTTCTCGAA 9925 Query 96954 ATGCGCAAAAACTCT-GGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTG 97012 | | ||||| || || |||| | | || | ||| | || || || || Sbjct 9924 CT-CAAAAAAAATCACGGGGATGAATCGAAAAAGGCGCGCGACATATTCACCGCGCTGTG 9866 Query 97013 GGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCC 97072 ||| || ||| |||||||| |||| || | | |||| | |||| || ||| ||| Sbjct 9865 GGTCCCGGATCTGTTCATGGAGCGAGTGGAGAAAAATGGCGAGTGGACGCTGATGGACCC 9806 Query 97073 CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGC 97132 || || || || | || || || |||||| |||| ||| || ||| | Sbjct 9805 TAACGAGTGTCCTGGGTTATCGGACTGTTGGGGCAAAGAATTTCGGGAGTTGTATGAGAA 9746 Query 97133 CTACGAGCAAGAGGGCCGATACGTGAG-ACGAGTCGATGCACGAGAACTGTGGAAGGCCA 97191 ||||||||||||||| | || | || || | || | | || ||| | | | Sbjct 9745 ATACGAGCAAGAGGGCAAGGGCTCAAGCAAGATTCCA-GCGAGGCACCTCTGGCAATCGA 9687 Query 97192 TCGT-GACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAAT 97250 | | ||| | ||| | || || ||| || ||||| ||||||||||| | ||| | Sbjct 9686 TTCTCGACT-CGCAGATCGAAACGGGAGTGCCATACATGCTCTACAAGGACTC-GTGCAA 9629 Query 97251 CGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAAT 97309 ||| | | | || || | ||| |||||||||||||| || |||||||||||||| || Sbjct 9628 CGCGAAATCCAATCACCAGCACCTGGGCACCATCAAGTGCAGTAATCTGTGCACGGAGAT 9569 Query 97310 TGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCC 97369 || |||||| | | || ||||||| || ||||| |||||| ||| | ||| || Sbjct 9568 CGTCGAGTACAGCGCACCTGACGAGATCGCCGTTTGTAATCTGGCCTCGATTTCTCTACC 9509 Query 97370 CAAGTTTGT 97378 ||| || || Sbjct 9508 CAAATTCGT 9500 >seq101120 Length=1587 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || || || || || ||||| ||| ||||||||||| | ||||| ||| | Sbjct 1587 GCGTTTGCGGCTGTCGAAGGGATCTTTTTTAGTGGTAGTTTTGCATCTATCTTCTGGTTG 1528 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| | ||||| ||| || |||||| ||||| || |||||||||| Sbjct 1527 AAGAAGCGCGGTGTAATGCCTGGATTGTGCTTCAGTAATGAGTTGATCAGTCGAGACGAG 1468 Query 125553 GGCCTACACTGTGACTTTGC 125572 || | |||||||||||||| Sbjct 1467 GGGATGCACTGTGACTTTGC 1448 >seq247245 Length=18620 Score = 91.5 bits (100), Expect = 2e-13 Identities = 358/553 (65%), Gaps = 19/553 (3%) Strand=Plus/Minus Query 96834 CCAATGCTCAGAATGTACAATGCAATGTC--ACGATACGTTACACAGGGCGGCAATAAAC 96891 |||||| || |||| |||| ||| ||| |||||| || | || || |||| | Sbjct 17529 CCAATGATCCAGATGTTCAAT-CAA-GTCGTACGATATGTAAACCAAGGTGGCAGG---C 17475 Query 96892 GGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCG 96951 | || || || || || ||||| | ||||| |||||| | ||| || || ||| ||| Sbjct 17474 GACCTGGTGCGATTGCAATCTACATCGAACCGTGGCACCCTGACATTGGCGAGTTTCTCG 17415 Query 96952 AGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCT 97011 | || ||||| ||| |||| | | || | || | || || || | Sbjct 17414 AACTGAAAAAAAATCATGGGGATGAATCGAAAAAGGCGCGCGATATATTCACCGCCCTGT 17355 Query 97012 GGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCC 97071 |||| || ||| |||||||| |||| || | | |||| | |||| || ||| || Sbjct 17354 GGGTCCCGGATCTGTTCATGGAGCGAGTGTAGAAAAATGGCGAGTGGACGCTGATGGACC 17295 Query 97072 CCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGG 97131 | || || || || | ||||| || |||||| |||| ||| || ||| | Sbjct 17294 CTAACGAGTGTCCTGGGTTATCCGACTGTTGGGGCAAAGAATTTCGGGAGTTGTATGAGA 17235 Query 97132 CCTACGAGCAAGAGGGCC---GAT-ACGTGAGACGAGT-CGATGCACGAGAACTGTGGAA 97186 ||||||||||||||| | | | | ||| || ||| || | || ||| | Sbjct 17234 AATACGAGCAAGAGGGCAAGGGCTCAAGCAAGATGACAGCGAGGCGC-----CTCTGGCA 17180 Query 97187 GGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGT 97246 | || || | ||| | || || ||| || ||||| ||||||||||| | || Sbjct 17179 ATCGATTCTGGACTCGCAGATCGAAACGGGAGTGCCATACATGCTCTACAAGGACTC-GT 17121 Query 97247 GAATCGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGG 97305 | | ||| | | | || || | ||| |||||||||||||| || ||||| ||||||| Sbjct 17120 GCAACGCGAAATCCAATCACCAGCACCTGGGCACCATCAAGTGCAGTAATCTCTGCACGG 17061 Query 97306 AAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATC 97365 | || || |||||| | | || ||||||| || ||||| |||||| ||| | || Sbjct 17060 AGATCGTCGAGTACAGCGCACCTGACGAGATCGCCGTTTGTAATCTGGCCTCGATTTCTC 17001 Query 97366 TGCCCAAGTTTGT 97378 | ||||| || || Sbjct 17000 TACCCAAATTCGT 16988 >seq201504 Length=1836 Score = 89.7 bits (98), Expect = 8e-13 Identities = 146/210 (70%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || |||||| |||||| ||||| ||||| || || | | || | | ||| | Sbjct 717 AAGAAGGCTGAATGGGCAATTCGTTGGATTGAAGATAAAGAATCGACCTTCGCGTTACGG 776 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 |||| || || || || || ||||| |||||||| || |||||||| | || || Sbjct 777 TTGGTCGCTTTTGCTGCGGTCGAGGGAATCTTCTTCAGTGGCAGTTTTGCATCTATATTC 836 Query 125487 TGGCT----CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATC 125542 ||||| ||||||| | | ||||| |||||| |||||||||||||| Sbjct 837 TGGCTGAAACAAGAAG----GTTTAATGCCTGGACTGTGTTCTAGTAACGAGTTTATCAG 892 Query 125543 TCGAGACGAGGGCCTACACTGTGACTTTGC 125572 |||||||||||| | |||||||||||||| Sbjct 893 TCGAGACGAGGGTTTGCACTGTGACTTTGC 922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738694720937040