Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq190029 84.2 1e-11 seq12368 84.2 1e-11 seq255005 82.4 4e-11 >seq190029 Length=2915 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| ||||||||||||| | || Sbjct 2447 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTACTCGG 2388 Query 11528 CCG 11530 ||| Sbjct 2387 CCG 2385 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| ||||||||||||| | || Sbjct 2759 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTACTCGG 2700 Query 11528 CCG 11530 ||| Sbjct 2699 CCG 2697 >seq12368 Length=1113 Score = 84.2 bits (92), Expect = 1e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||| |||||||||||||||||||||||| ||||||||||||| | ||||| Sbjct 858 TCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTACTCGGCCG 917 >seq255005 Length=6667 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| || ||||||||||||||||||||| ||||||||||||| | || Sbjct 1051 GGCTCGAACCCACGACATTYGCGTTATTAGCACGACGCTCTAACCAACTGAGCTACTCGG 1110 Query 11528 CCG 11530 ||| Sbjct 1111 CCG 1113 Lambda K H 0.641 0.410 0.925 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260677724901304