Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq207016 98.7 3e-15 >seq207016 Length=9131 Score = 98.7 bits (108), Expect = 3e-15 Identities = 446/692 (64%), Gaps = 22/692 (3%) Strand=Plus/Plus Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680 ||| |||| ||| |||||||| || || ||||||||| | ||| | ||| | | || || Sbjct 5470 AATCAAGGGCGACTCCATCGAAGGAATATTTGACACAGTGAAGGACTGTAGTATCATCTC 5529 Query 363681 CAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACA 363739 || |||| || ||||| ||| | || |||| | |||| | || | || | | Sbjct 5530 AAAACATGCCGGTGGAATCGGTCTCAATATACACAGTATTCGGTCGACTGG-CACTCCAA 5588 Query 363740 TTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT- 363798 || ||| || ||| ||| || || || ||| ||| | | |||| |||| Sbjct 5589 TTGCCGGGACGAACGGAACCTCTAACGGTCTCACTCCAATGATCCAGATGTT---CAATT 5645 Query 363799 ACT--GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 || ||| | ||||| |||||||| ||| ||||| || || ||||| ||||| Sbjct 5646 ACGTCGCGCGATACGTTGACCAGGGAGGAAACAAGCGGCCTGGTGCTTTTGCCATGTACA 5705 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAA 363915 ||||||| || | || ||| |||||||| || ||| |||||| || || | Sbjct 5706 TCGAGCCGTGGCACCCGGACATTGGCGAGTTTCTCGATCTCAAGAAAAATCATGG----A 5761 Query 363916 GAGGAATTGCGT---GCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATG 363972 || |||| | ||||| || | ||| ||| | ||| | | || | || ||| Sbjct 5762 GATGAATCGAAGAAGGCACGCGACATATTCACTGCTTTGTGGATCCCGGATCTGTTCATG 5821 Query 363973 AAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032 |||| |||||| | | | ||| | || | || ||| | ||||| || | Sbjct 5822 GAGCGAGTGGAGAAAAATGGCGAGTGGACGCTGATGGATCCTCACAAGTGTCCCGGGTTA 5881 Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTA-TACGAAAAGTATGAATCGGAGGGAAA 364091 || || ||||| || || | | || | || || ||||| || ||||| || Sbjct 5882 TCGGACTGCTGGGGCGAGGAAT-TCCGGCAGTTGTATGAGAAGTACGAGCAAGAGGGCAA 5940 Query 364092 GG-CTCGTAAGACAATTCCCGCACAGAAGC-TATGGTTTGCCATCATGGATTCGCAGATT 364149 || |||| | | || || || ||| || | ||| | || | || || |||||| Sbjct 5941 GGGCTCG-AGCAAGATGCCTGCG-AGACGCCTCTGGCAATCGATTCTCGACTCKCAGATT 5998 Query 364150 GAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAG 364209 || || ||| ||| || ||| | ||||| || || || ||| || ||||| || ||| Sbjct 5999 GAAACGGGAGTACCATACATGCTCTACAAGGACTCTTGTAACGCGAAATCCAATCACCAG 6058 Query 364210 CACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCC 364269 ||||| || || || || || || || || || |||||||| || |||| || || Sbjct 6059 CACCTGGGCACCATCAAGTGCAGTAATCTCTGCACGGAGATTATCGAGTACAGTGCACCT 6118 Query 364270 GACGAGACTGCCGTATGTAACCTTGCGTCGAT 364301 ||||||| ||||| ||||| | || ||||| Sbjct 6119 GACGAGATCGCCGTTTGTAATTTGGCTTCGAT 6150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1299091057808628