Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06]
255,254 sequences; 1,428,149,015 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq234766 82.4 6e-11
seq203341 82.4 6e-11
seq201368 82.4 6e-11
seq179109 82.4 6e-11
seq137650 82.4 6e-11
>seq234766
Length=12425
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| || | || |||| ||| || || |||||||| || |||||||| |||
Sbjct 10670 CCTCCTCGCAGTCGCAACACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAATCGCTG 10729
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || ||||||| | ||| || || || | || | | || |||||| ||
Sbjct 10730 AGAGTTCTGCCGTCCTCGAGTTGCTTCCCGGCGAAGATCAATCTTTGCTGGTCCGGGGGG 10789
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||||||||| || | | ||| || | | | ||||||| | |||
Sbjct 10790 ATTCCCTCTTTGTCTTGGATCTTCGCCTTGACGTTTTCAATGGTGTCGCTCGATTCCACC 10849
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| | ||||| ||||| || || || || |||||||| || ||||||
Sbjct 10850 TCTAACGTGATAGTTTTCCCCGTGAGAGTCTTGACAAATATTTGCATT 10897
>seq203341
Length=12288
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| || | || |||| ||| || || |||||||| || |||||||| |||
Sbjct 11248 CCTCCTCGCAGTCGCAACACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAATCGCTG 11189
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || ||||||| | ||| || || || | || | | || |||||| ||
Sbjct 11188 AGAGTTCTGCCGTCCTCGAGTTGCTTCCCGGCGAAGATCAATCTTTGCTGGTCCGGGGGG 11129
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||||||||| || | | ||| || | | | ||||||| | |||
Sbjct 11128 ATTCCCTCTTTGTCTTGGATCTTCGCCTTGACGTTTTCAATGGTGTCGCTCGATTCCACC 11069
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| | ||||| ||||| || || || || |||||||| || ||||||
Sbjct 11068 TCTAACGTGATAGTTTTCCCCGTGAGAGTCTTGACAAATATTTGCATT 11021
>seq201368
Length=23957
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||||| | |||||| | |||||| || || || || || || ||||| || |
Sbjct 6282 CCTCCTCGTAATCGCAGTACTAAATGCAGAGTCGATTCTTTCTGAATATTGTAATCCGAT 6223
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| |||| ||||||||||| || || |||| | | ||||| || |||
Sbjct 6222 AATGTTCGACCGTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGAGGA 6163
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| || ||||| || ||||| | || || | | | ||||| | | || |
Sbjct 6162 ATTCCTTCTTTATCTTGAATTTTCGCTTTTACGTTTTCGATTGTGTCACTCGATTCTACT 6103
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| | || || |||||||||||||| |||||||| || || ||||||
Sbjct 6102 TCAAGAGTAATTGTTTTTCCGGTCAGTGTTTTGACGAATATTTGCATT 6055
>seq179109
Length=3537
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| || | || |||| ||| || || |||||||| || |||||||| |||
Sbjct 2497 CCTCCTCGCAGTCGCAACACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAATCGCTG 2438
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || ||||||| | ||| || || || | || | | || |||||| ||
Sbjct 2437 AGAGTTCTGCCGTCCTCGAGTTGCTTCCCGGCGAAGATCAATCTTTGCTGGTCCGGGGGG 2378
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||||||||| || | | ||| || | | | ||||||| | |||
Sbjct 2377 ATTCCCTCTTTGTCTTGGATCTTCGCCTTGACGTTTTCAATGGTGTCGCTCGATTCCACC 2318
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| | ||||| ||||| || || || || |||||||| || ||||||
Sbjct 2317 TCTAACGTGATAGTTTTCCCCGTGAGAGTCTTGACAAATATTTGCATT 2270
>seq137650
Length=3290
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| || | || |||| ||| || || |||||||| || |||||||| |||
Sbjct 1756 CCTCCTCGCAGTCGCAACACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAATCGCTG 1697
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || ||||||| | ||| || || || | || | | || |||||| ||
Sbjct 1696 AGAGTTCTGCCGTCCTCGAGTTGCTTCCCGGCGAAGATCAATCTTTGCTGGTCCGGGGGG 1637
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||||||||| || | | ||| || | | | ||||||| | |||
Sbjct 1636 ATTCCCTCTTTGTCTTGGATCTTCGCCTTGACGTTTTCAATGGTGTCGCTCGATTCCACC 1577
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| | ||||| ||||| || || || || |||||||| || ||||||
Sbjct 1576 TCTAACGTGATAGTTTTCCCCGTGAGAGTCTTGACAAATATTTGCATT 1529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403827808449460
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |