Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq175777 168 1e-36 seq166687 167 4e-36 seq247245 165 2e-35 seq207016 159 7e-34 seq153922 152 1e-31 seq246644 132 9e-26 seq250887 125 1e-23 >seq175777 Length=2924 Score = 168 bits (186), Expect = 1e-36 Identities = 300/429 (70%), Gaps = 8/429 (2%) Strand=Plus/Minus Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || ||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||| Sbjct 2923 TTGCTGCACTTGATGGTGCCCAGGTGCTGGTGGTTGGATTTCGCGTTGCACGCGTCCTTG 2864 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTC 244866 ||||||||| | ||| | || ||||||| ||| | | |||| | || | | ||||||| Sbjct 2863 TAGAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCGAGAATCGAT-TGCCAGAGGCG 2805 Query 244867 CCTAGCCTTGACCGTCCTGCGAG-CCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 ||| || | | | || |||| ||||||||||| |||||| |||| | Sbjct 2804 CCTCGCTGGCATCTTGCT-CGAGCCCTTGCCCTCTTGCTCGTACTTCTCATACAACTGCC 2746 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985 ||| | ||||||| || || ||||| ||| ||| ||| || ||| Sbjct 2745 GGAATTGCTCGCCCCAGCAGTCCGATAACCCGGGACACTTGTGAGGGTCCATCAGCGTCC 2686 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 ||||||| | || || | || |||||| || || |||||||| ||||| ||| | Sbjct 2685 ACTCGCCATTTTTCTCCACTCGCTCCATGAACAGATCCGGGATCCACAGGGCGGTGAATA 2626 Query 245046 GGTCCCTGGTCCTCTGCTCG-TCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAAA 245103 ||| | | | ||| ||| | | || ||| ||| || | ||||| | || || Sbjct 2625 TGTCGCGCGCCTTCT--TCGATTCATCCCCGTGATTCCTCTTGAGCTCGAGGAACTCGCC 2568 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 | ||| |||||| ||||| ||||| | || | |||||||| |||||||||||||| Sbjct 2567 AATGTCCGGGTGCCACGGCTCGATGTACATGGCAAAAGCGCCGGGTCGCTTGTTGCCTCC 2508 Query 245164 CTGGTCCAC 245172 |||||| || Sbjct 2507 CTGGTCGAC 2499 >seq166687 Length=11573 Score = 167 bits (184), Expect = 4e-36 Identities = 177/226 (78%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 |||||| || || ||||| | ||| || | | |||||| ||| ||||| ||||| || Sbjct 9523 GGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCACAG 9582 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 |||||||||||||||||||||||||||||||||||||| || |||||||| | |||||| Sbjct 9583 ATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAGTCCTT 9642 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGT 244865 |||||||||| | ||| | || || |||| ||| | | |||| | || | | |||||||| Sbjct 9643 GTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCGAGAATCGAT-TGCCAGAGGT 9701 Query 244866 CCCTAGCCTTGACCGTCCTGC--GAG-CCTTGCCCTCTGCCTCGTA 244908 ||| | || || || ||| ||| ||||||||||| |||||| Sbjct 9702 GCCTCG-CTGGA--ATCTTGCTTGAGCCCTTGCCCTCTTGCTCGTA 9744 >seq247245 Length=18620 Score = 165 bits (182), Expect = 2e-35 Identities = 174/224 (78%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 |||||| || || ||||| | ||| || | | |||||| ||| ||||| |||||||| Sbjct 17011 GGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCAGAG 17070 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 |||||||||||||||||||||||||||||||||||||| || |||||||| | |||||| Sbjct 17071 ATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAGTCCTT 17130 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGT 244865 |||||||||| | ||| | || || |||| ||| | | | || | || | | ||||||| Sbjct 17131 GTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCCAGAATCGAT-TGCCAGAGGC 17189 Query 244866 CCCTAGCCTTGACCGTCCTGCGAG-CCTTGCCCTCTGCCTCGTA 244908 ||| || | | | | || ||| ||||||||||| |||||| Sbjct 17190 GCCTCGCTGTCATCTTGCT-TGAGCCCTTGCCCTCTTGCTCGTA 17232 >seq207016 Length=9131 Score = 159 bits (176), Expect = 7e-34 Identities = 333/489 (68%), Gaps = 8/489 (2%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGG--TGTACTGGACAATCTCGGTGCAGA 244745 |||| || || ||||| | ||| || || || |||||| || |||||| ||||||| Sbjct 6144 GCCAAATTACAAACGGCGATCTCGTC--AGGTGCACTGTACTCGATAATCTCCGTGCAGA 6087 Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 | |||||||||||||||||||||||||||||||||||||| || ||||| || | ||||| Sbjct 6086 GATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTACAAGAGTCCT 6027 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGG 244864 ||||||||||| | || | || || || | ||| | | |||| | || | | ||||||| Sbjct 6026 TGTAGAGCATGTATGGTACTCCCGTTTCAATCTGMGAGTCGAGAATCGAT-TGCCAGAGG 5968 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAG-CCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923 || || | | | || |||| ||||||||||| |||||| |||| Sbjct 5967 CGTCTCGCAGGCATCTTGCT-CGAGCCCTTGCCCTCTTGCTCGTACTTCTCATACAACTG 5909 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983 | ||| || ||||||| || || ||||| ||| || ||| || | Sbjct 5908 CCGGAATTCCTCGCCCCAGCAGTCCGATAACCCGGGACACTTGTGAGGATCCATCAGCGT 5849 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||||||||| | || || | || |||||| || || |||||||| | || ||| Sbjct 5848 CCACTCGCCATTTTTCTCCACTCGCTCCATGAACAGATCCGGGATCCACAAAGCAGTGAA 5789 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 | ||| | | | ||| | || ||| || ||| | || || | ||| || Sbjct 5788 TATGTCGCGTGCCTTCTTCGATTCATCTCCATGATTTTTCTTGAGATCGAGAAACTCGCC 5729 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 | ||| |||||| ||||| ||||| | || | || || ||||||||||| ||||| Sbjct 5728 AATGTCCGGGTGCCACGGCTCGATGTACATGGCAAAAGCACCAGGCCGCTTGTTTCCTCC 5669 Query 245164 CTGGTCCAC 245172 |||||| || Sbjct 5668 CTGGTCAAC 5660 >seq153922 Length=2492 Score = 152 bits (168), Expect = 1e-31 Identities = 131/162 (81%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 |||||| || || ||||| | ||| || | | |||||| ||| ||||| ||||| || Sbjct 882 GGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCACAG 941 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 || ||||||||||||||||||||||||||||||||||| || |||||||| | |||||| Sbjct 942 ATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAGTCCTT 1001 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAG 244848 |||||||||| | ||| | || ||||||| ||| | | |||| Sbjct 1002 GTAGAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCGAG 1043 >seq246644 Length=20408 Score = 132 bits (146), Expect = 9e-26 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 ||| || || || ||||| | ||| || | | |||||| ||| ||||| ||||| || Sbjct 12383 GGCAAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCACAG 12324 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 || ||||||||||||||||||||||||||||||||||| || |||||||| | |||||| Sbjct 12323 ATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTTGCGTTGCACGAGTCCTT 12264 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTG 244839 |||||||||| | | | || || |||| ||| Sbjct 12263 GTAGAGCATGTATGACATTCCCGTTTCGATCTG 12231 >seq250887 Length=22715 Score = 125 bits (138), Expect = 1e-23 Identities = 105/126 (83%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || ||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||| Sbjct 2 TTGCTGCACTTGATGGTGCCCAGGTGCTGGTGGTTGGATTTCGCGTTGCACGCGTCCTTG 61 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTC 244866 ||||||||| | ||| | || ||||||| ||| | | |||| | || | | ||||||| | Sbjct 62 TAGAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCGAGAATCGAT-TGCCAGAGGCC 120 Query 244867 CCTAGC 244872 ||| || Sbjct 121 CCTCGC 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 941326120523040