Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq207016 93.3 5e-14 seq166687 93.3 5e-14 seq153922 91.5 2e-13 seq247245 84.2 3e-11 >seq207016 Length=9131 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || || |||| |||||| || | | |||| || || ||||||| ||||| ||||| Sbjct 6150 ATCGAAGCCAAATTACAAACGGCGATCTCGTCAGGTGCACTGTACTCGATAATCTCCGTG 6091 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 || | ||| | ||| |||||||||| || || ||||| || || | |||||| | Sbjct 6090 CAGAGATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTACAAGAG 6031 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 114652 |||||||| ||||||||||| ||||| || | || || | |||||| | | |||| Sbjct 6030 TCCTTGTAGAGCATGTATGGTACTCCCGTTTCAATCTGMGAGTCGAGAATCGATTGCCAG 5971 Query 114653 A 114653 | Sbjct 5970 A 5970 >seq166687 Length=11573 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || || ||||||||||| || | | |||| || | ||||||| | || ||||| Sbjct 9518 ATCGAGGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTG 9577 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 |||| ||| | ||| |||||||||| || || ||||| || || | ||| |||| Sbjct 9578 CACAGATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAG 9637 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 114652 |||||||| |||||||||||| ||||| || | || || | |||||| | | |||| Sbjct 9638 TCCTTGTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCGAGAATCGATTGCCAG 9697 Query 114653 A 114653 | Sbjct 9698 A 9698 >seq153922 Length=2492 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || || ||||||||||| || | | |||| || | ||||||| | || ||||| Sbjct 877 ATCGAGGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTG 936 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 |||| ||| | ||| |||||||||| || || ||||| || || | ||| |||| Sbjct 937 CACAGATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAG 996 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 114642 |||||||| |||||||| ||| |||||||| | || || | |||||| Sbjct 997 TCCTTGTAGAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCGAGAAT 1046 >seq247245 Length=18620 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || || ||||||||||| || | | |||| || | ||||||| | || ||||| Sbjct 17006 ATCGAGGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTG 17065 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 || | ||| | ||| |||||||||| || || ||||| || || | ||| |||| Sbjct 17066 CAGAGATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAG 17125 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 114652 |||||||| |||||||||||| ||||| || | || || | ||||| | | |||| Sbjct 17126 TCCTTGTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCCAGAATCGATTGCCAG 17185 Query 114653 A 114653 | Sbjct 17186 A 17186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595447638802320