Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq153922 116 4e-21 seq166687 111 2e-19 seq246644 98.7 1e-15 >seq153922 Length=2492 Score = 116 bits (128), Expect = 4e-21 Identities = 475/744 (64%), Gaps = 11/744 (1%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 ||||| ||||||||||| || || | || || | || |||||| || |||| Sbjct 1613 CCGACACTGTTCAACGCTGGCACAAGATTACCTCAACTCTCGAGCTGTTTCTTGCTGACA 1554 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | ||| | ||| ||| ||||| | ||| | | | ||||||| | |||||| Sbjct 1553 ATCAAAGATGACAGTATCGAAGGAATATACGATACGGTTAGGGACTGTAGTATCATCTCC 1494 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 ||||| || || |||||||| ||| ||| ||| | | || | | || || | ||| Sbjct 1493 AAATATGCCGGTGGAATCGGTCTCAATGTACACAGCATTCGGTCGAATGGCTCTTCAATC 1434 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 | || || || || || || || ||| ||| ||| ||| ||||| | | Sbjct 1433 ACCAAGACGAACAATACATCGAAAGGTCTGACCCCAATGATCCAGGTATTCAATCAAGTC 1374 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 ||| |||| ||| || || ||| | ||||| | || |||| |||| Sbjct 1373 ATGCGACACGTAAGCCAAGGAGGC---AGGCGTCCTGGTTCGATTGCAATCTACATCGAA 1317 Query 94198 CCCTGGCACGCGGACGT-GCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 || |||||| ||||| | | | |||| |||| || ||| || || || | || Sbjct 1316 CCGTGGCACCCGGACATTGGCGAGTTTC-TCGAACTCAAAAAAAATCATGGGGATGAATC 1258 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 | | | ||| | ||| | ||| ||| | ||| | || || || || ||| | || || Sbjct 1257 GAAAAAGGCGCGGGACATATTCACTGCTTTATGGATTCCGGATCTGTTCATGGAGCGAGT 1198 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 ||||||||| | ||||| || | || || || |||||||| | || ||| Sbjct 1197 CGAGAAAAATGGTGACTGGACGCTGATGGACCCTAACGAGTGTCCCGGGTTATCGGACTG 1138 Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC---AG 94433 ||| || | ||| || ||||||| ||||| | | ||||| | || Sbjct 1137 TTGGGGCAAGGAATTTCGGGAGTTGTATGAGAAATACGAGCAAGAAGACAAGGGCTCAAG 1078 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| ||| |||||| || ||| | ||| | ||| ||| | |||||||| Sbjct 1077 CAAG---ATGTCTGCTAGACGCCTTTGGCAATCGATTCTCGACTCGCAGATCGAGACGGG 1021 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 ||| ||||| | | ||||||||| |||||| || ||||| || |||||||| || Sbjct 1020 AGTGCCGTACATGCTCTACAAGGACTCGTGCAACGCGAAATCCAATCACCAGCACCTGGG 961 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 |||||| || ||||||||||| ||||| |||||||| | | || |||||||| Sbjct 960 CACCATCAAGTGCAGCAATCTGTGCACGGAGATCGTCGAGTACAGCGCACCTGACGAGAT 901 Query 94614 TGCTGTGTGTAACCTGGGCTCCAT 94637 || || ||||| |||| ||| || Sbjct 900 CGCCGTTTGTAATCTGGCCTCGAT 877 >seq166687 Length=11573 Score = 111 bits (122), Expect = 2e-19 Identities = 449/700 (64%), Gaps = 13/700 (2%) Strand=Plus/Minus Query 93943 TGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGAC 94002 |||||| || |||| | ||| | ||| ||| ||||| ||||| | | |||||| Sbjct 10209 TGTTTCTTGCTGACAATCAAAGATGACAGTATCGAAGGAATATTCGAAACGGTTAAGGAC 10150 Query 94003 TGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCC 94062 ||| | |||||| ||||| ||||| |||||||| ||| ||| ||| | | || | Sbjct 10149 TGTAGTATCATCTCCAAATATGCGGGTGGAATCGGTCTCAATGTACACAGCATTCGGTCG 10090 Query 94063 AGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGG 94122 || | || | ||| | | || || | | || | || || ||| ||| ||| | Sbjct 10089 AGAGACTCTTTAATCGCCAGGACGAACGAAATATCGGAAGGTCTGACCCCAATGATCCAG 10030 Query 94123 GTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTC 94182 | ||||| | | || || || || ||| || || || | ||| | | Sbjct 10029 ATGTTCAATCAAGTCGCACGATATGTAAGCCAAGGGGGC---AGACGTCCTGGTGCGATT 9973 Query 94183 GCGGTCTATCTCGAGCCCTGGCACGCGGACGT-GCAGGCTTTCATCGACCTGCGAAAGAA 94241 || |||| |||| || |||||| | || | | | |||| |||| || ||| || Sbjct 9972 GCAATCTACATCGAACCGTGGCACCCTGATATTGGCGAATTTC-TCGAACTCAAAAAAAA 9914 Query 94242 CCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCT 94301 ||||| | || | | | ||| | ||| | ||| ||| || ||||| || || || Sbjct 9913 TCACGGGGATGAATCGAAAAAGGCGCGCGACATATTCACCGCGCTGTGGGTCCCGGATCT 9854 Query 94302 TTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCC 94361 || ||| | || || |||||||| || |||| || | || || || ||||| Sbjct 9853 GTTCATGGAGCGAGTGGAGAAAAATGGCGAGTGGACGCTGATGGACCCTAACGAGTGTCC 9794 Query 94362 CGGACTGTCCGACGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC 94420 || | || ||| ||| || | | ||| | || ||||||| ||||| Sbjct 9793 TGGGTTATCGGACTGTTGGGGCAAAGAATTTCGG-GAGTTGTATGAGAAATACGAGCAAG 9735 Query 94421 AGGGCAAGGCC---AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACG 94477 ||||||||| | || ||| || | | ||| | || ||| | ||| | ||| Sbjct 9734 AGGGCAAGGGCTCAAGCAAGATTCCAG---CGAGGCACCTCTGGCAATCGATTCTCGACT 9678 Query 94478 TACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCA 94537 ||| | || ||||| ||| ||||| | | ||||||||| |||||| || |||| Sbjct 9677 CGCAGATCGAAACGGGAGTGCCATACATGCTCTACAAGGACTCGTGCAACGCGAAATCCA 9618 Query 94538 ACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATA 94597 | || |||||||| || |||||| || ||||||||||| ||||| |||||||| | Sbjct 9617 ATCACCAGCACCTGGGCACCATCAAGTGCAGTAATCTGTGCACGGAGATCGTCGAGTACA 9558 Query 94598 CTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCAT 94637 | || |||||||| || || ||||| |||| ||| || Sbjct 9557 GCGCACCTGACGAGATCGCCGTTTGTAATCTGGCCTCGAT 9518 >seq246644 Length=20408 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 94479 ACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAA 94538 |||| | || ||||| | | | ||||| | | ||||||||| |||||| || ||||| Sbjct 12230 ACAGATCGAAACGGGAATGTCATACATGCTCTACAAGGACTCGTGCAACGCAAAATCCAA 12289 Query 94539 CCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATAC 94598 || |||||||| || |||||| || ||||||||||| ||||| |||||||| | Sbjct 12290 TCACCAGCACCTGGGCACCATCAAGTGCAGCAATCTGTGCACGGAGATCGTCGAGTACAG 12349 Query 94599 TTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCAT 94637 | || |||||||| || || ||||| || | ||| || Sbjct 12350 CGCACCTGACGAGATCGCCGTTTGTAATCTTGCCTCGAT 12388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493144699053840