Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq207016 91.5 2e-13 seq166687 91.5 2e-13 seq153922 91.5 2e-13 seq246644 86.0 8e-12 seq247245 82.4 9e-11 >seq207016 Length=9131 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || |||| |||||| || | | |||| || || ||||||| ||||| ||||| Sbjct 6150 ATCGAAGCCAAATTACAAACGGCGATCTCGTCAGGTGCACTGTACTCGATAATCTCCGTG 6091 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 || | ||| | ||| |||||||||| || || ||||| || || | |||||| | Sbjct 6090 CAGAGATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTACAAGAG 6031 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 116603 |||||||||||||| ||||| ||||| || | || || | |||||| Sbjct 6030 TCCTTGTAGAGCATGTATGGTACTCCCGTTTCAATCTGMGAGTCGAGAAT 5981 >seq166687 Length=11573 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || ||||||||||| || | | |||| || | ||||||| | || ||||| Sbjct 9518 ATCGAGGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTG 9577 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 |||| ||| | ||| |||||||||| || || ||||| || || | ||| |||| Sbjct 9578 CACAGATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAG 9637 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 116603 |||||||||||||| |||||| ||||| || | || || | |||||| Sbjct 9638 TCCTTGTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCGAGAAT 9687 >seq153922 Length=2492 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || ||||||||||| || | | |||| || | ||||||| | || ||||| Sbjct 877 ATCGAGGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTG 936 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 |||| ||| | ||| |||||||||| || || ||||| || || | ||| |||| Sbjct 937 CACAGATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAG 996 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 116603 |||||||||||||| || ||| |||||||| | || || | |||||| Sbjct 997 TCCTTGTAGAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCGAGAAT 1046 >seq246644 Length=20408 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || || |||||||| || | | |||| || | ||||||| | || ||||| Sbjct 12388 ATCGAGGCAAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTG 12329 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 |||| ||| | ||| |||||||||| || || ||||| || |||| ||| |||| Sbjct 12328 CACAGATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTTGCGTTGCACGAG 12269 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585 |||||||||||||| |||| | | ||||| || Sbjct 12268 TCCTTGTAGAGCATGTATGACATTCCCGTTTC 12237 >seq247245 Length=18620 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || ||||||||||| || | | |||| || | ||||||| | || ||||| Sbjct 17006 ATCGAGGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTG 17065 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 || | ||| | ||| |||||||||| || || ||||| || || | ||| |||| Sbjct 17066 CAGAGATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAG 17125 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 116603 |||||||||||||| |||||| ||||| || | || || | ||||| Sbjct 17126 TCCTTGTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCCAGAAT 17175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611549697914640