Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq153922 86.0 1e-11 seq213618 84.2 3e-11 seq211385 84.2 3e-11 seq101120 84.2 3e-11 seq12314 84.2 3e-11 >seq153922 Length=2492 Score = 86.0 bits (94), Expect = 1e-11 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 204828 TGGGTAGACACACGGCGGCCAGATTGCACACCGCGGGTCT-GTGTGGCTCGCTCACCTCC 204886 |||||||| | | | ||||||||| || || ||| ||| || || |||| ||| Sbjct 866 TGGGTAGAGAAATCGAGGCCAGATTACAAACGGCGA-TCTCGTCAGGTGCGCTGTACTCG 924 Query 204887 ACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGACTTG 204946 |||||||| ||||||| || | |||||| | |||| ||||| || || || || Sbjct 925 ACGATCTCCGTGCACAGATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTC 984 Query 204947 CGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TCGCAG 205005 ||| || ||||||||||| | |||| |||||| ||| |||| ||||| || ||| || Sbjct 985 GCGTTGCACGAGTCCTTGTAGAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCG-AG 1043 Query 205006 AAT 205008 ||| Sbjct 1044 AAT 1046 >seq213618 Length=17143 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 159911 TTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTG 159970 ||||| | || || |||||||| ||||||| |||||||| ||| ||| ||||| || Sbjct 155 TTAAATAACAGACAAGCAAAGTCACAGTGCATCCCCTCGTCTCGACTGATCAACTCATT- 97 Query 159971 GACATGATG---AGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAA 160027 || ||| | | || ||||| | || ||| || | ||| || || | |||||| Sbjct 96 -AC-TGAAGCACAATCCAGGCATTACACCGCGCTTCTTCAACCAGAAGATAGATGCAAAA 39 Query 160028 GCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||| |||||||||||||| || || ||||||||||| Sbjct 38 CTACCACTAAAAAAGATCCCTTCGACAGCCGCAAACGC 1 >seq211385 Length=3642 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 159911 TTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTG 159970 ||||| | || || |||||||| ||||||| |||||||| ||| ||| ||||| || Sbjct 2400 TTAAATAACAGACAAGCAAAGTCACAGTGCATCCCCTCGTCTCGACTGATCAACTCATT- 2342 Query 159971 GACATGATG---AGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAA 160027 || ||| | | || ||||| | || ||| || | ||| || || | |||||| Sbjct 2341 -AC-TGAAGCACAATCCAGGCATTACACCGCGCTTCTTCAACCAGAAGATAGATGCAAAA 2284 Query 160028 GCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||| |||||||||||||| || || ||||||||||| Sbjct 2283 CTACCACTAAAAAAGATCCCTTCGACAGCCGCAAACGC 2246 >seq101120 Length=1587 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 159911 TTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTG 159970 ||||| | || || |||||||| ||||||| |||||||| ||| ||| ||||| || Sbjct 1433 TTAAATAACAGACAAGCAAAGTCACAGTGCATCCCCTCGTCTCGACTGATCAACTCATT- 1491 Query 159971 GACATGATG---AGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAA 160027 || ||| | | || ||||| | || ||| || | ||| || || | |||||| Sbjct 1492 -AC-TGAAGCACAATCCAGGCATTACACCGCGCTTCTTCAACCAGAAGATAGATGCAAAA 1549 Query 160028 GCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||| |||||||||||||| || || ||||||||||| Sbjct 1550 CTACCACTAAAAAAGATCCCTTCGACAGCCGCAAACGC 1587 >seq12314 Length=2576 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 159911 TTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTG 159970 ||||| | || || |||||||| ||||||| |||||||| ||| ||| ||||| || Sbjct 1243 TTAAATAACAGACAAGCAAAGTCACAGTGCATCCCCTCGTCTCGACTGATCAACTCATT- 1301 Query 159971 GACATGATG---AGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAA 160027 || ||| | | || ||||| | || ||| || | ||| || || | |||||| Sbjct 1302 -AC-TGAAGCACAATCCAGGCATTACACCGCGCTTCTTCAACCAGAAGATAGATGCAAAA 1359 Query 160028 GCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||| |||||||||||||| || || ||||||||||| Sbjct 1360 CTACCACTAAAAAAGATCCCTTCGACAGCCGCAAACGC 1397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 792618118182240