Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq247245 98.7 1e-15 seq126347 95.1 1e-14 seq246644 91.5 2e-13 seq166687 89.7 6e-13 seq153922 89.7 6e-13 >seq247245 Length=18620 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 109747 CGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCA 109806 || ||||| ||||| | ||| | || |||||||| || ||||| || ||||||||||| Sbjct 16372 CGAAGGTAAATGTTGCTGGTGAATGGCTCGAAACATTCGTTGTTTCCAAGGATTTGTGCC 16431 Query 109807 GTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 ||| |||||| ||||| ||||||| ||| |||||||||| || ||| Sbjct 16432 GTGCTAGCTGTTGGCATTGGAGCCACGAGGAGACTGTTTCTGACACC 16478 >seq126347 Length=2598 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 109747 CGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCA 109806 || ||||| ||||| | ||| | || || ||||| || ||||| || ||||||||||| Sbjct 2003 CGAAGGTAAATGTTGCTGGTGAATGGCTCAAAACATTCGTTGTTTCCAAGGATTTGTGCC 2062 Query 109807 GTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 ||| |||||| ||||| ||||||| ||| |||||||||| || ||| Sbjct 2063 GTGCTAGCTGTTGGCATTGGAGCCACGAGGAGACTGTTTCTGACACC 2109 >seq246644 Length=20408 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 110238 TTTGTCGTAATCGAACGT--TTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGAC 110295 ||| || ||||||| || ||| | ||| ||| || ||||||| |||| ||| || Sbjct 12440 TTTTTCAAAATCGAAAGTCTTTTTGGCTCG--ATTAACGAATTTGGGTAGAGAAATCGAG 12383 Query 110296 GCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAG 110355 |||||||| || || | ||||||| || |||| || | || ||||| |||| Sbjct 12382 GCAAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCACAGA 12323 Query 110356 TTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTA 110415 ||| | ||| ||| |||| || || ||||| ||||| | |||||| | ||||| Sbjct 12322 TTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTTGCGTTGCACGAGTCCTTG 12263 Query 110416 TAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 ||||||||||||| | || ||||| ||||| Sbjct 12262 TAGAGCATGTATGACATTCCCGTTTCGATCTGT 12230 >seq166687 Length=11573 Score = 89.7 bits (98), Expect = 6e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 110238 TTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGC 110297 ||| || |||||||||| || | | ||| || ||||||| |||| ||| || || Sbjct 9466 TTTTTCAAAATCGAACGTCTTTTTAGCTCGATTAACGAATTTGGGTAGAGAAATCGAGGC 9525 Query 110298 AAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTT 110357 ||||| || || | ||||||| || |||| || | || ||||| |||| || Sbjct 9526 CAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCACAGATT 9585 Query 110358 GGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATA 110417 | ||| ||| |||| || || ||||| ||||| | |||||| | ||||| || Sbjct 9586 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAGTCCTTGTA 9645 Query 110418 GAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAAT 110459 |||||||||||| || ||||| |||| || | |||||| Sbjct 9646 GAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCGAGAAT 9687 >seq153922 Length=2492 Score = 89.7 bits (98), Expect = 6e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 110238 TTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGC 110297 ||| || |||||||||| || | || ||| || ||||||| |||| ||| || || Sbjct 825 TTTTTCAAAATCGAACGTCTTTTTAGCCCGATTAACGAATTTGGGTAGAGAAATCGAGGC 884 Query 110298 AAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTT 110357 ||||| || || | ||||||| || |||| || | || ||||| |||| || Sbjct 885 CAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCACAGATT 944 Query 110358 GGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATA 110417 | | ||| ||| |||| || || ||||| ||||| | |||||| | ||||| || Sbjct 945 GCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAGTCCTTGTA 1004 Query 110418 GAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAAT 110459 ||||||||| || || || || |||| || | |||||| Sbjct 1005 GAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCGAGAAT 1046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587096769001200