Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq211385 120 4e-22 seq12314 114 2e-20 seq201504 95.1 1e-14 seq247670 91.5 2e-13 seq243336 86.0 7e-12 seq217494 82.4 9e-11 >seq211385 Length=3642 Score = 120 bits (132), Expect = 4e-22 Identities = 180/252 (71%), Gaps = 8/252 (3%) Strand=Plus/Minus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 ||||||| |||||| | | ||||||||| || ||||||||||| || ||||| || Sbjct 2067 ATATAAGAATCAATCAACAGTGAATACATTTCTGAATGAATATTTTCCATTGCTATTTGG 2008 Query 37506 AAACCATAAAAA-CACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAA 37564 |||| |||||| | || ||||| | | || || || || | ||| || | || || Sbjct 2007 AAACTGTAAAAAGCTTCT-GCTTCCGGCATTTTTACTTCTTTCAGAAATCTTTCTGCCAA 1949 Query 37565 GTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATG 37624 |||||||||||||| |||||||| ||||| || || ||||| |||| || ||||| Sbjct 1948 ATTTTCATTAACTATTCCATCACTGGCTGCGAAAAAGGCAAGGACATGCGAAATGAAATG 1889 Query 37625 TCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATC 37684 | ||| || | ||| | |||| ||| ||||||| || |||| | ||| || Sbjct 1888 TTGTTCTTCCGGTTTTAAGTCGTTCC-ATC-----TATCTTTCGACAAATTTATTTCTTC 1835 Query 37685 AACGGTCCAAAA 37696 ||| |||||||| Sbjct 1834 AACTGTCCAAAA 1823 >seq12314 Length=2576 Score = 114 bits (126), Expect = 2e-20 Identities = 165/229 (72%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 37469 ATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAA-CACCTAGCTT 37527 ||||||||| || ||||||||||| || ||||| || |||| |||||| | || |||| Sbjct 1599 ATACATTTCTGAATGAATATTTTCCATTGCTATTTGGAAACTGTAAAAAGCTTCT-GCTT 1657 Query 37528 CAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCAC 37587 | | | || || || || | ||| || | || || |||||||||||||| ||||||| Sbjct 1658 CCGGCATTTTTACTTCTTTCAGAAATCTTTCTGCCAAATTTTCATTAACTATTCCATCAC 1717 Query 37588 TAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTT 37647 | ||||| || || ||||| |||| || |||||| ||| || | ||| | | Sbjct 1718 TGGCTGCGAAAAAGGCAAGGACATGCGAAATGAAATGTTGTTCTTCCGGTTTTAAGTCGT 1777 Query 37648 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 ||| ||| ||||||| || |||| | ||| ||||| |||||||| Sbjct 1778 TCC-ATC-----TATCTTTCGACAAATTTATTTCTTCAACTGTCCAAAA 1820 >seq201504 Length=1836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 37160 ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTC 37219 |||||| || ||||| |||||||| ||||| || ||||| || |||| ||| || || || Sbjct 941 ATATTTGAATAATAAGCATGCAAAGTCACAGTGCAAACCCTCGTCTCGACTGATAAACTC 882 Query 37220 ATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAA 37279 ||| | | | ||| |||||||||||| || ||| | ||| ||||| | |||||| Sbjct 881 GTTACTAGAACACAGTCCAGGCATTAAACCTTCTTGTTTCAGCCAGAATATAGATGCAAA 822 Query 37280 AGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTAC 37321 | ||| ||||| || || || || || ||||| || || Sbjct 821 ACTGCCACTGAAGAAGATTCCCTCGACCGCAGCAAAAGCGAC 780 Score = 91.5 bits (100), Expect = 2e-13 Identities = 190/278 (68%), Gaps = 19/278 (7%) Strand=Plus/Minus Query 37425 tttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACT----ATACATTTCAGA 37480 ||||| |||||| || || || |||||||||| | |||| ||||||||| || Sbjct 615 TTTTTCTCTTCA---TCAGTAATGTAAGTATCAA----TCAACTTTGAATACATTTCCGA 563 Query 37481 GTGAATATTTTCAATAGCTATCTGAAAACCATAAAAA-CACCTAGCTTCAGATAATTGAA 37539 |||| |||||| || ||||| || |||| |||||| | || ||||| | | || | Sbjct 562 ATGAACATTTTCCATCGCTATTTGGAAACTGTAAAAAGCTTCT-GCTTCCGGCATTTTTA 504 Query 37540 CATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGA 37599 | || | | ||| || | || | || ||||| || || |||||||| || ||||| | Sbjct 503 CTTCCTGTAGAAATCTTTCTGCAAGATTCTCATTGACGATTCCATCACTGGCCGCAAAAA 444 Query 37600 AAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAA 37659 | ||||| |||| | || |||| | ||| | ||||| |||| ||| Sbjct 443 ACGCAAGTACATGTGAAATGAAATACTGCTGATCCGACGTTAATTCGTTCC-ATC----- 390 Query 37660 TATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 |||| || |||||| | ||| ||||| ||||||||| Sbjct 389 TATCCTTGTTTAAATCGATTTCTTCAACTGTCCAAAAA 352 >seq247670 Length=3146 Score = 91.5 bits (100), Expect = 2e-13 Identities = 190/278 (68%), Gaps = 19/278 (7%) Strand=Plus/Plus Query 37425 tttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACT----ATACATTTCAGA 37480 ||||| |||||| || || || |||||||||| | |||| ||||||||| || Sbjct 903 TTTTTCTCTTCA---TCAGTAATGTAAGTATCAA----TCAACTTTGAATACATTTCCGA 955 Query 37481 GTGAATATTTTCAATAGCTATCTGAAAACCATAAAAA-CACCTAGCTTCAGATAATTGAA 37539 |||| |||||| || ||||| || |||| |||||| | || ||||| | | || | Sbjct 956 ATGAACATTTTCCATCGCTATTTGGAAACTGTAAAAAGCTTCT-GCTTCCGGCATTTTTA 1014 Query 37540 CATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGA 37599 | || | | ||| || | || | || ||||| || || |||||||| || ||||| | Sbjct 1015 CTTCCTGTAGAAATCTTTCTGCAAGATTCTCATTGACGATTCCATCACTGGCCGCAAAAA 1074 Query 37600 AAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAA 37659 | ||||| |||| | || |||| | ||| | ||||| |||| ||| Sbjct 1075 ACGCAAGTACATGTGAAATGAAATACTGCTGATCCGACGTTAATTCGTTCC-ATC----- 1128 Query 37660 TATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 |||| || |||||| | ||| ||||| ||||||||| Sbjct 1129 TATCCTTGTTTAAATCGATTTCTTCAACTGTCCAAAAA 1166 Score = 89.7 bits (98), Expect = 6e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 37160 ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTC 37219 |||||| || ||||| || ||||||||||| || ||||| || |||| ||| || || || Sbjct 577 ATATTTGAATAATAAGCACGCAAAATCACAGTGCAAACCCTCGTCTCGACTGATAAACTC 636 Query 37220 ATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAA 37279 ||| | | | ||| ||||||||| || || ||| | ||| ||||| | |||||| Sbjct 637 GTTACTAGAACACAGTCCAGGCATTAAATCTTCTTGTTTCAGCCAGAATATAGATGCAAA 696 Query 37280 AGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTAC 37321 | ||| ||||| || || || || || ||||| || || Sbjct 697 ACTGCCACTGAAGAAGATTCCCTCGACCGCAGCAAAAGCGAC 738 >seq243336 Length=1505 Score = 86.0 bits (94), Expect = 7e-12 Identities = 180/264 (68%), Gaps = 16/264 (6%) Strand=Plus/Plus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACT----ATACATTTCAGAGTGAATATTTTCAA 37494 ||| || || |||||||||| | |||| ||||||||| || |||| |||||| | Sbjct 1 ATCAGTAATGTAAGTATCAA----TCAACTTTGAATACATTTCCGAATGAACATTTTCCA 56 Query 37495 TAGCTATCTGAAAACCATAAAAA-CACCTAGCTTCAGATAATTGAACATCGTTAAAAAAC 37553 | ||||| || |||| |||||| | || ||||| | | || || || | | ||| Sbjct 57 TCGCTATTTGGAAACTGTAAAAAGCTTCT-GCTTCCGGCATTTTTACTTCCTGTAGAAAT 115 Query 37554 CTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATAT 37613 || | || | || ||||| || || |||||||| || ||||| || ||||| |||| | Sbjct 116 CTTTCTGCAAGATTCTCATTGACGATTCCATCACTGGCCGCAAAAAACGCAAGTACATGT 175 Query 37614 TTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAA 37673 || |||| | ||| | ||||| |||| ||| |||| || |||| Sbjct 176 GAAATGAAATACTGCTGATCCGACGTTAATTCGTTCC-ATC-----TATCCTTGTTTAAA 229 Query 37674 TCAACTTCATCAACGGTCCAAAAA 37697 || | ||| ||||| ||||||||| Sbjct 230 TCGATTTCTTCAACTGTCCAAAAA 253 >seq217494 Length=14875 Score = 82.4 bits (90), Expect = 9e-11 Identities = 162/237 (68%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 37158 AAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAAT 37217 ||||||||||||| || || || || ||||| || | || || ||||| || |||| Sbjct 7256 AAATATTTAAACATCAAGCAAGCGAAGTCACAGTGGAGGCCCTCGTCTCTGCTGATCAGC 7197 Query 37218 TCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA 37277 ||||| ||| | |||||||| || || | ||| || | ||||||||||| || Sbjct 7196 TCATTGCTGAAGCAAAGACCTGGCATCAATCCGCGTTTCTTCAGCCAAAATATTGAGGCG 7137 Query 37278 AAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAA 37337 || ||| ||||| || ||||| || || ||||| || || | || | ||||| Sbjct 7136 AAGCTGCCACTGAAGAAGATCCCTTCCACGGCAGCAAAAGCAACTACTCGGATTCCGAAT 7077 Query 37338 GTTGAACTAT-AATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACA 37393 | || ||| | ||| || ||||| | | ||| || |||||| || |||||| Sbjct 7076 G-TGGACTCTCTATCGGAGATCCAACGTAGAGCCCATTCAGCCTTTTTTTGAACACA 7021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590426909594160