Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq207016 150 3e-31 seq247245 138 2e-27 seq166687 134 3e-26 seq153922 134 3e-26 seq246644 116 7e-21 seq236677 102 2e-16 seq130724 102 2e-16 >seq207016 Length=9131 Score = 150 bits (166), Expect = 3e-31 Identities = 336/494 (68%), Gaps = 18/494 (4%) Strand=Plus/Minus Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 |||| || |||||||| | ||| | || | ||||||| || ||||| ||||| || Sbjct 6144 GCCAAATTACAAACGGCGATCTCGTCAGGTGCACTGTACTCGATAATCTCCGTGCAGAGA 6085 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614 || ||||| |||||||||||||| |||||| || || || ||||| ||| |||||| Sbjct 6084 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTACAAGAGTCCTTG 6025 Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674 ||||||||||| || || || || | ||| || | || ||| ||||||| Sbjct 6024 TAGAGCATGTATGGTACTCCCGTTTCAATCTGMGAGTCGAGAATCGATTGCCAGAGGCGT 5965 Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTC 213733 || || | | | || || || | | | | |||||||| || || | || Sbjct 5964 CTCGCA--GGCATCTTGCTCGA--GCCCTTGCCCTCTTGCTCGTACTTCTCATACAACTG 5909 Query 213734 GTTGAATTCGTGGCCCCAGACCCTGTCCAGT---CCCGGACAGGATGCG-GGACACATGA 213789 |||||| | ||||||| | |||| | || ||||| || | ||| ||| | Sbjct 5908 CCGGAATTCCTCGCCCCAG---CAGTCCGATAACCCGGGACACT-TGTGAGGATCCATCA 5853 Query 213790 GGCTCCAGTCCCCGTCATCTCTG-ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 | |||| || || | | ||| |||| || ||||||||| ||||||| ||||| || Sbjct 5852 GCGTCCACTCGCCATTTT-TCTCCACTCGCTCCATGAACAGATCCGGGATCCACAAAGCA 5794 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||||| | ||| | | | || || || ||||| ||||| ||||| ||||| Sbjct 5793 GTGAATATGTCGCGTGCCTTCTTCGATTCATCTCCATGATTTTTCTTGAGATCGAGAAAC 5734 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG--- 213965 || ||||||| |||||||||||| ||||| |||||||| || || |||| |||| Sbjct 5733 TCGCCAATGTCCGGGTGCCACGGCTCGATGTACATGGCAAAAGCACCAGGCCGCTTGTTT 5674 Query 213966 CCGCCCTGGTCCAC 213979 || |||||||| || Sbjct 5673 CCTCCCTGGTCAAC 5660 >seq247245 Length=18620 Score = 138 bits (152), Expect = 2e-27 Identities = 329/486 (68%), Gaps = 11/486 (2%) Strand=Plus/Plus Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 |||||| || |||||||| | ||| | || | ||||||| | |||||| ||||| || Sbjct 17011 GGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCAGAG 17070 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTT 213613 || ||||| |||||||||||||| |||||| || || || |||||| || ||||| Sbjct 17071 ATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAGTCCTT 17130 Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTA 213673 |||||||||||| || || || || | ||| || |||| ||| ||||||| Sbjct 17131 GTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCCAGAATCGATTGCCAGAGGCG 17190 Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCT 213732 ||| || || | | || || ||| | | | | |||||| | || || | || Sbjct 17191 CCTCGC--TGTCATCTTGCTTG--AGCCCTTGCCCTCTTGCTCGTATTTCTCATACAACT 17246 Query 213733 CGTTGAATTCGTGGCCCCAGACCCT-GTCCAGTCCCGGACA-GGATGCGGGACACATGAG 213790 | ||||| | |||||| || | | | || ||||| | ||| | ||| || Sbjct 17247 CCCGAAATTCTTTGCCCCA-ACAGTCGGATAACCCAGGACACTCGTTAGGGTC-CATCAG 17304 Query 213791 GCTCCAGTCCCCGTCATCTCT-GACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGG 213849 |||| || || | | ||| |||| || ||||||||| |||||||||||||| |||| Sbjct 17305 CGTCCACTCGCCAT-TTTTCTACACTCGCTCCATGAACAGATCCGGGACCCACAGGGCGG 17363 Query 213850 TGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGT 213909 |||| | || | | | | || || | ||| ||||| ||| || ||||| | Sbjct 17364 TGAATATATCGCGCGCCTTTTTCGATTCATCCCCATGATTTTTTTTCAGTTCGAGAAACT 17423 Query 213910 CAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTGCCGC 213969 | ||||| | ||||||||| || |||||||| |||| || || || | | |||| | Sbjct 17424 CGCCAATGTCAGGGTGCCACGGTTCGATGTAGATTGCAATCGCACCAGGTCGCCTGCCAC 17483 Query 213970 CCTGGT 213975 | |||| Sbjct 17484 CTTGGT 17489 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 212947 GGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGC 213006 |||||| ||| ||| | ||||||| | |||||||| || || || ||||| |||| Sbjct 16376 GGTAAATGTTGCTGGTGAATGGCTCGAAACATTCGTTGTTTCCAAGGATTTGTGCCGTGC 16435 Query 213007 TGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 | ||||| ||||| |||||||| ||||||||||| || || |||| Sbjct 16436 TAGCTGTTGGCATTGGAGCCACGAGGAGACTGTTTCTGACACCGT 16480 >seq166687 Length=11573 Score = 134 bits (148), Expect = 3e-26 Identities = 330/488 (68%), Gaps = 17/488 (3%) Strand=Plus/Plus Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 |||||| || |||||||| | ||| | || | ||||||| | |||||| |||||||| Sbjct 9523 GGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCACAG 9582 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTT 213613 || ||||| |||||||||||||| |||||| || || || |||||| || ||||| Sbjct 9583 ATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAGTCCTT 9642 Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTA 213673 |||||||||||| || || || || | ||| || | || ||| |||||||| Sbjct 9643 GTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCGAGAATCGATTGCCAGAGGTG 9702 Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCT 213732 ||| || || | || || ||| | | | | |||||| | || || | || Sbjct 9703 CCTCGC--TGGAATCTTGCTTG--AGCCCTTGCCCTCTTGCTCGTATTTCTCATACAACT 9758 Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCC---AGTCCCGGACA-GGATGCGGGACACATG 213788 | ||||| | |||||| | |||| | || ||||| | ||| | ||| Sbjct 9759 CCCGAAATTCTTTGCCCCA---ACAGTCCGATAACCCAGGACACTCGTTAGGGTC-CATC 9814 Query 213789 AGGCTCCAGTC-CCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 || |||| || || | |||| |||| || ||||||||| ||||||||||||||||| Sbjct 9815 AGCGTCCACTCGCCATTTTTCTC-CACTCGCTCCATGAACAGATCCGGGACCCACAGCGC 9873 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCC-AGAGTTTTTGCGCAGATCTAGAA 213906 |||||| | ||| | | | | || || | || || ||||| | || || |||| Sbjct 9874 GGTGAATATGTCGCGCGCCTTTTTCGATTCATCCCCGTGATTTTTTTTG-AGTTCGAGAA 9932 Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTGC 213966 | || || || | ||||||||| || |||||||| |||| || || || | ||| Sbjct 9933 ATTCGCCAATATCAGGGTGCCACGGTTCGATGTAGATTGCAATCGCACCAGGACGTCTGC 9992 Query 213967 CGCCCTGG 213974 | || ||| Sbjct 9993 CCCCTTGG 10000 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 212947 GGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGC 213006 |||||| ||| ||| | ||||||| || |||||||| || || || |||| |||| Sbjct 8881 GGTAAATGTTGCTGGTGAATGGCTCGAAGCATTCGTTGTTTCCAAGGATTTGTGACGTGC 8940 Query 213007 TGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 | ||||| ||||| |||||||| ||||||||||| || || |||| Sbjct 8941 TAGCTGTTGGCATCGGAGCCACGAGGAGACTGTTTCTGACACCGT 8985 >seq153922 Length=2492 Score = 134 bits (148), Expect = 3e-26 Identities = 330/488 (68%), Gaps = 17/488 (3%) Strand=Plus/Plus Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 |||||| || |||||||| | ||| | || | ||||||| | |||||| |||||||| Sbjct 882 GGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCACAG 941 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTT 213613 |||||||| |||||||||||||| |||||| || || || |||||| || ||||| Sbjct 942 ATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCACGAGTCCTT 1001 Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTA 213673 |||||||||||| || || ||||| | ||| || | || ||| ||| ||| Sbjct 1002 GTAGAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCGAGAATCGATTGCCAAAGGCG 1061 Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCT 213732 || || ||| | || || ||| | | | | |||||| | || || | || Sbjct 1062 TCTAGC--AGACATCTTGCTTG--AGCCCTTGTCTTCTTGCTCGTATTTCTCATACAACT 1117 Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCC---AGTCCCGGACA-GGATGCGGGACACATG 213788 | ||||| | |||||| | |||| | || ||||| | ||| | ||| Sbjct 1118 CCCGAAATTCCTTGCCCCA---ACAGTCCGATAACCCGGGACACTCGTTAGGGTC-CATC 1173 Query 213789 AGGCTCCAGTC-CCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 || ||||||| || | |||| ||||| || ||||||||| ||||| | ||| | || Sbjct 1174 AGCGTCCAGTCACCATTTTTCTC-GACTCGCTCCATGAACAGATCCGGAATCCATAAAGC 1232 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCA-GAGTTTTTGCGCAGATCTAGAA 213906 ||||| | ||||| | | | || || | ||| || ||||| | || || |||| Sbjct 1233 AGTGAATATGTCCCGCGCCTTTTTCGATTCATCCCCATGATTTTTTTTG-AGTTCGAGAA 1291 Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTGC 213966 | || ||||||| ||||||||| || |||||||| |||| | || || | | ||| Sbjct 1292 ACTCGCCAATGTCCGGGTGCCACGGTTCGATGTAGATTGCAATCGAACCAGGACGCCTGC 1351 Query 213967 CGCCCTGG 213974 | || ||| Sbjct 1352 CTCCTTGG 1359 >seq246644 Length=20408 Score = 116 bits (128), Expect = 7e-21 Identities = 105/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 ||| || || |||||||| | ||| | || | ||||||| | |||||| |||||||| Sbjct 12383 GGCAAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTACTCGACGATCTCCGTGCACAG 12324 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTT 213613 |||||||| |||||||||||||| |||||| || || ||||||||| || ||||| Sbjct 12323 ATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTTGCGTTGCACGAGTCCTT 12264 Query 213614 GTAGAGCATGTA 213625 |||||||||||| Sbjct 12263 GTAGAGCATGTA 12252 >seq236677 Length=19943 Score = 102 bits (112), Expect = 2e-16 Identities = 125/170 (74%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 |||| || ||||||||| ||||||| ||||| || ||||| | ||| | | | || || Sbjct 19781 ACTCGCTCCATGAACAGATCCGGGATCCACAAAGCAGTGAATATGTCGCGTGCCTTCTTC 19722 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || ||||| ||||| ||||| ||||| || ||||||| |||||||||| Sbjct 19721 GATTCATCTCCATGATTTTTCTTGAGATCGAGAAACTCGCCAATGTCCGGGTGCCACGGC 19662 Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC 213979 || ||||| |||||||| || || |||| |||| || |||||||| || Sbjct 19661 TCGATGTACATGGCAAAAGCACCAGGCCGCTTGTTTCCTCCCTGGTCAAC 19612 >seq130724 Length=3734 Score = 102 bits (112), Expect = 2e-16 Identities = 125/170 (74%), Gaps = 3/170 (2%) Strand=Plus/Plus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 |||| || ||||||||| ||||||| ||||| || ||||| | ||| | | | || || Sbjct 163 ACTCGCTCCATGAACAGATCCGGGATCCACAAAGCAGTGAATATGTCGCGTGCCTTCTTC 222 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || ||||| ||||| ||||| ||||| || ||||||| |||||||||| Sbjct 223 GATTCATCTCCATGATTTTTCTTGAGATCGAGAAACTCGCCAATGTCCGGGTGCCACGGC 282 Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC 213979 || ||||| |||||||| || || |||| |||| || |||||||| || Sbjct 283 TCGATGTACATGGCAAAAGCACCAGGCCGCTTGTTTCCTCCCTGGTCAAC 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928560581583360