Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq207016 111 5e-19 seq247245 96.9 1e-14 seq166687 96.9 1e-14 seq187297 91.5 4e-13 seq152943 91.5 4e-13 seq129533 91.5 4e-13 seq153922 89.7 2e-12 seq252976 87.8 5e-12 >seq207016 Length=9131 Score = 111 bits (122), Expect = 5e-19 Identities = 516/809 (64%), Gaps = 39/809 (5%) Strand=Plus/Minus Query 155588 AATAGACGCCAGATTACATACCGCAGTCTCCTTGTC--GT-CGCTGTATTCTACAATCTC 155644 ||| || |||| |||||| || || |||| ||| || | ||||| || | |||||| Sbjct 6151 AATCGAAGCCAAATTACAAACGGCGATCTC---GTCAGGTGCACTGTACTCGATAATCTC 6095 Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704 ||| || ||| | |||||||||||| | | || || || ||||| |||||| Sbjct 6094 CGTGCAGAGATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTACA 6035 Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764 || |||||||| || |||||||| ||| || || ||||| | ||| |||||| | | Sbjct 6034 AGAGTCCTTGTAGAGCATGTATGGTACTCCCGTTTCAATCTGMGAGTCGAGAATCGATTG 5975 Query 155765 CCAGAGG----TCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCA 155820 ||||||| || | ||||| ||||| | | |||| || ||| || ||| Sbjct 5974 CCAGAGGCGTCTCGCAGGCAT---CTTGCTCG-AGCCCTTGCCCTCTTGCTCGTACTTCT 5919 Query 155821 TATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGC 155880 ||||| | ||| | ||||| || | || || | || || ||||| | || Sbjct 5918 CATACAACTGCCGGAATTCCTCGCCCCAGCAGTCCGATAACCCGGGACACTTGTGAGGAT 5859 Query 155881 AAAACAGCGACCA-----AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGC 155935 | ||||| ||| ||||| | | || |||||||| || | ||| Sbjct 5858 CCATCAGCGTCCACTCGCCATTTTTCTCC-----ACTCGCTCCATGAACAGATCCGGGAT 5804 Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAG 155995 ||| | |||| ||| | ||| | |||||| | ||||| || ||||| ||| || Sbjct 5803 CCACAAAGCAGTGAATATGTCGCGTGCCTTCTTCGATTCATCTCCATGATTTTTCTTGAG 5744 Query 155996 CTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATT 156055 || | || || |||| || || || ||||| | ||||| |||||| |||| Sbjct 5743 ATCGAGAAACTCGCCAATGTCCGGGTGCCACGGCTCGATGTACATGGCAAAAGCACCAGG 5684 Query 156056 CCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT--AGCATA 156110 || |||| || ||||| || || || || || | ||||| ||| || | ||| Sbjct 5683 CCGCTTGTTTCCTCCCTGGTCAACGTATCGCGCGACGTAATTGA--ACATCTGGATCATT 5626 Query 156111 GGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACA 156170 ||| | | ||| || || || || || || ||| ||| | | |||| || |||| | Sbjct 5625 GGAGTGAGACCGTTAGAGGTTCCGTTCGTCCCGGCAATTGGAGTGCCAGTCGACCGAATA 5566 Query 156171 TTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACA 156230 | || |||| || || || ||||| | ||| || || | || ||||| || Sbjct 5565 CTGTGTATATTGAGACCGATTCCACCGGCATGTTTTGAGATGATACTACAGTCCTTCACT 5506 Query 156231 GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGT-AGATAGCACGAACTT-- 156287 || | || || ||||| || || || || ||||| || | || | | ||| Sbjct 5505 GTGTCAAATATTCCTTCGATGGAGTC----GCCCTTGATTGTCAACAAGAAACAGCTTGA 5450 Query 156288 -AATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTT 156346 | ||||| | | |||| ||||| || ||||| || | || ||||| || |||| Sbjct 5449 GAGTTGAGCGAATCTTTTTCCTGCGTTAAAAAGTGTTGGAGAAGCGTGAATGAACCACTT 5390 Query 156347 ATTAGACATATAATCGTATGTCTCCTTAA 156375 | ||||| || |||||||| | ||| Sbjct 5389 CTCTGACATCAGATTGTATGTCTTCATAA 5361 >seq247245 Length=18620 Score = 96.9 bits (106), Expect = 1e-14 Identities = 508/797 (64%), Gaps = 32/797 (4%) Strand=Plus/Plus Query 155588 AATAGACGCCAGATTACATACCGCAGTCTCCTTGTC--GT-CGCTGTATTCTACAATCTC 155644 ||| || ||||||||||| || || |||| ||| || ||||||| || || ||||| Sbjct 17005 AATCGAGGCCAGATTACAAACGGCGATCTC---GTCAGGTGCGCTGTACTCGACGATCTC 17061 Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704 ||| || ||| | |||||||||||| | | || || || ||||| ||| || Sbjct 17062 CGTGCAGAGATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCA 17121 Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764 | |||||||| || |||||||| ||| || || ||||| | |||||||||| | | Sbjct 17122 CGAGTCCTTGTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCCAGAATCGATTG 17181 Query 155765 CCAGAGGTCACGGGCATTAAT-TTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATAT 155823 ||||||| | || | || ||||||| | |||| || ||| |||||| || Sbjct 17182 CCAGAGGCGCCTCGCTGTCATCTTGCTTG-AGCCCTTGCCCTCTTGCTCGTATTTCTCAT 17240 Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAA 155883 ||| | || | || | || |||| || | ||||| |||| | ||| | Sbjct 17241 ACAACTCCCGAAATTCTTTGCCCCAACAGTCGGATAACCCAGGACACTCGTTAGGGTCCA 17300 Query 155884 ACAGCGACCA-----AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCA 155938 ||||| ||| ||||| ||| || |||||||| || | ||| |||| Sbjct 17301 TCAGCGTCCACTCGCCATTTTTCTAC-----ACTCGCTCCATGAACAGATCCGGGACCCA 17355 Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998 | || ||| | || | |||||| | ||||| || ||||| || || || Sbjct 17356 CAGGGCGGTGAATATATCGCGCGCCTTTTTCGATTCATCCCCATGATTTTTTTTCAGTTC 17415 Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCT 156058 | || || |||| ||||| || || || | || || |||| |||| | Sbjct 17416 GAGAAACTCGCCAATGTCAGGGTGCCACGGTTCGATGTAGATTGCAATCGCACCAGGTCG 17475 Query 156059 CTTGCCACCCTGATCTACATACCGAGCAGTCTT-ATTGAAGACACCT--AGCATAGGAAT 156115 | ||||||| || | |||||| || | | ||| ||||| ||| || | ||| || | Sbjct 17476 CCTGCCACCTTGGTTTACATATCGTAC-GACTTGATTGA--ACATCTGGATCATTGGGGT 17532 Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGC-GAACCAGATGAGCGAACATTAT 156174 | ||| | || || || || | | || ||| || ||| || |||| | | Sbjct 17533 CAGACCTTCCGATGTTTTGTTCGTCCTGGCGAT-TGCAGAGCCATTCGACCGAATGCTGT 17591 Query 156175 GAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTAT 156234 | | || || | || ||||| | |||| ||||| | || ||||| || |||| Sbjct 17592 GTACATTGAGACTGATTCCACCGGCATATTTGGAAATGATACTACAGTCCTTAACCGTAT 17651 Query 156235 TGAAAATACCTTCAATAGAATCATCTTCCATTGATAG---TAGATAGCACGAACTTAATT 156291 ||| || ||||| ||| ||||||| |||| || | | ||| ||| |||| Sbjct 17652 CGAATATTCCTTCGATACTGTCATCTTTGATTGTCAGCAAGAAACAGCTCGA---GAATT 17708 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 ||| | | |||||||| ||| || ||||| || | || ||||| || |||| | | Sbjct 17709 GAGCTAATCTTGTTCCAGAGTTAAAAAGTGTTGGAGACGCGTGAATGAACCACTTCTCCG 17768 Query 156352 ACATATAATCGTATGTC 156368 |||| || ||||||| Sbjct 17769 ACATCATATTGTATGTC 17785 >seq166687 Length=11573 Score = 96.9 bits (106), Expect = 1e-14 Identities = 136/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 155588 AATAGACGCCAGATTACATACCGCAGTCTCCTTGTC--GT-CGCTGTATTCTACAATCTC 155644 ||| || ||||||||||| || || |||| ||| || ||||||| || || ||||| Sbjct 9517 AATCGAGGCCAGATTACAAACGGCGATCTC---GTCAGGTGCGCTGTACTCGACGATCTC 9573 Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704 |||||| ||| | |||||||||||| | | || || || ||||| ||| || Sbjct 9574 CGTGCACAGATTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCGTTGCA 9633 Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764 | |||||||| || |||||||| ||| || || ||||| | ||| |||||| | | Sbjct 9634 CGAGTCCTTGTAGAGCATGTATGGCACTCCCGTTTCGATCTGCGAGTCGAGAATCGATTG 9693 Query 155765 CCAGAGGT 155772 |||||||| Sbjct 9694 CCAGAGGT 9701 >seq187297 Length=18085 Score = 91.5 bits (100), Expect = 4e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 251812 ACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGG 251871 ||||| ||| |||||| || ||| || | | ||||||||||| |||||||||||| Sbjct 10401 ACTTTTCCTTGAAGTGTTTCAATCAAGTGACCAACTGTCATACGACTAGGAATAGCATGG 10342 Query 251872 GGATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCA 251931 ||||| || || ||||| || | | ||| || | |||||||||||||||| || || Sbjct 10341 GGATTAATAATTATGTCAGGAGTGATTCCTTCGGATGTGAAGGGCATATCCTCTT-GTCG 10283 Query 251932 ATAATG-TTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||| || | ||| ||||| || || || || ||||| || || || ||||| Sbjct 10282 ATATTGAATACCACATGTTCCTTTCTGACCATGTCGAGATGCAAATTTGTCCCCAAT 10226 >seq152943 Length=3249 Score = 91.5 bits (100), Expect = 4e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 251812 ACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGG 251871 ||||| ||| |||||| || ||| || | || ||||||||||| |||||||||||| Sbjct 2935 ACTTTTCCTTGAAGTGTTTCAATCAAGTGACCAATTGTCATACGACTAGGAATAGCATGG 2876 Query 251872 GGATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCA 251931 || || || || ||||| || | | ||| || | |||||||||||||||| || || Sbjct 2875 GGGTTAATAATTATGTCAGGAGTTATTCCTTCGGATGTGAAGGGCATATCCTCTT-GTCG 2817 Query 251932 ATAATG-TTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||| || | ||| ||||| || || || || ||||| || || || ||||| Sbjct 2816 ATATTGAATACCACATGTTCCTTTCTGACCATGTCGAGATGCAAATTTGTCCCCAAT 2760 >seq129533 Length=6596 Score = 91.5 bits (100), Expect = 4e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 251812 ACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGG 251871 ||||| ||| |||||| || ||| || | || ||||||||||| |||||||||||| Sbjct 6154 ACTTTTCCTTGAAGTGTTTCAATCAAGTGACCAATTGTCATACGACTAGGAATAGCATGG 6213 Query 251872 GGATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCA 251931 || || || || ||||| || | | ||| || | |||||||||||||||| || || Sbjct 6214 GGGTTAATAATTATGTCAGGAGTTATTCCTTCGGATGTGAAGGGCATATCCTCTT-GTCG 6272 Query 251932 ATAATG-TTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||| || | ||| ||||| || || || || ||||| || || || ||||| Sbjct 6273 ATATTGAATACCACATGTTCCTTTCTGACCATGTCGAGATGCAAATTTGTCCCCAAT 6329 >seq153922 Length=2492 Score = 89.7 bits (98), Expect = 2e-12 Identities = 173/252 (69%), Gaps = 9/252 (4%) Strand=Plus/Plus Query 155526 GTTACGTCTGCTAATTTCACATAGTCAAATGT---TTTATCCTCATTTACAAACATACCA 155582 ||||| ||| |||||| || | || || || |||| || ||| || || | Sbjct 811 GTTACTTCTATTAATTTTTCAAAATCGAACGTCTTTTTAGCCCGATTAACGAATTTGGGT 870 Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTC--GT-CGCTGTATTCTACA 155639 ||| ||| || ||||||||||| || || |||| ||| || ||||||| || || Sbjct 871 AGAGAAATCGAGGCCAGATTACAAACGGCGATCTC---GTCAGGTGCGCTGTACTCGACG 927 Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 ||||| |||||| || | |||||||||||| | | || || || ||||| | Sbjct 928 ATCTCCGTGCACAGATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTCGCG 987 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || | |||||||| || ||||| || ||| ||||| ||||| | ||| |||||| Sbjct 988 TTGCACGAGTCCTTGTAGAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCGAGAATC 1047 Query 155760 TTTAGCCAGAGG 155771 | |||| ||| Sbjct 1048 GATTGCCAAAGG 1059 >seq252976 Length=34949 Score = 87.8 bits (96), Expect = 5e-12 Identities = 133/185 (72%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 302491 TCAATTCCGTCATCGCCGTA--GGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGG 302548 |||| ||| || || || || |||| |||||| | | | | | | ||||||||| | Sbjct 11511 TCAAGTCCATCTTCCCCATAACGGAA--CTGAATTAACTGATCCATTTGATTTCTTACTG 11454 Query 302549 TCATATCATAACCAATCATAA-TGTCTTCCATACTCTTGATTAAACGACGCTGAATATAA 302607 | |||| || | ||| | || || ||||| || ||||| ||||| |||||||| Sbjct 11453 TTTTATCGTATGACACCATGACTGACT-CCATAGCTTTTATTAACCGACGTTGAATATAT 11395 Query 302608 CCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGG 302667 |||||| || ||||||||||| ||||| || | ||| | | ||| |||||||||||| Sbjct 11394 CCAGTTTCAGCAGTTTTTACAGCAGTATCGATAATACCTTCTCTACCTCCCATAGCATGG 11335 Query 302668 AAGAA 302672 || || Sbjct 11334 AAAAA 11330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1467004106088598