Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq145165 150 2e-30 seq145164 150 2e-30 seq14906 150 2e-30 seq254839 116 5e-20 seq217143 89.7 6e-12 >seq145165 Length=2190 Score = 150 bits (166), Expect = 2e-30 Identities = 150/189 (79%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 1592111 CGCACCGACGACATCTCGCCG-TGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCC 1592168 ||||| |||||||| || | | |||||| |||||| ||||| || || ||| ||| | Sbjct 1878 CGCACGGACGACAT-TCCCAGCTGGGACCTGGAGTTCCTGCGA-GTGGACCAGGGCACGC 1935 Query 1592169 TCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGT 1592228 | || ||| | ||| | |||||||||||||| ||||||||| ||||| || | | | Sbjct 1936 TGTTCGAGCTCATCATGGCCGCCAACTACCTGGACATCAAGGGGCTGCTGGACGTGTGCT 1995 Query 1592229 GCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTA 1592288 ||||| |||||||||||||||||||||||| |||||||||||||| | |||||||| | Sbjct 1996 GCAAGCAGGTGGCCAACATGATCAAGGGCAAGACGCCCGAGGAGATCAGGAAGACCTTCA 2055 Query 1592289 ACATCAAGT 1592297 | ||||||| Sbjct 2056 ATATCAAGT 2064 >seq145164 Length=2234 Score = 150 bits (166), Expect = 2e-30 Identities = 150/189 (79%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 1592111 CGCACCGACGACATCTCGCCG-TGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCC 1592168 ||||| |||||||| || | | |||||| |||||| ||||| || || ||| ||| | Sbjct 1922 CGCACGGACGACAT-TCCCAGCTGGGACCTGGAGTTCCTGCGA-GTGGACCAGGGCACGC 1979 Query 1592169 TCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGT 1592228 | || ||| | ||| | |||||||||||||| ||||||||| ||||| || | | | Sbjct 1980 TGTTCGAGCTCATCATGGCCGCCAACTACCTGGACATCAAGGGGCTGCTGGACGTGTGCT 2039 Query 1592229 GCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTA 1592288 ||||| |||||||||||||||||||||||| |||||||||||||| | |||||||| | Sbjct 2040 GCAAGCAGGTGGCCAACATGATCAAGGGCAAGACGCCCGAGGAGATCAGGAAGACCTTCA 2099 Query 1592289 ACATCAAGT 1592297 | ||||||| Sbjct 2100 ATATCAAGT 2108 >seq14906 Length=5425 Score = 150 bits (166), Expect = 2e-30 Identities = 150/189 (79%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 1592111 CGCACCGACGACATCTCGCCG-TGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCC 1592168 ||||| |||||||| || | | |||||| |||||| ||||| || || ||| ||| | Sbjct 1029 CGCACGGACGACAT-TCCCAGCTGGGACCTGGAGTTCCTGCGA-GTGGACCAGGGCACGC 1086 Query 1592169 TCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGT 1592228 | || ||| | ||| | |||||||||||||| ||||||||| ||||| || | | | Sbjct 1087 TGTTCGAGCTCATCATGGCCGCCAACTACCTGGACATCAAGGGGCTGCTGGACGTGTGCT 1146 Query 1592229 GCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTA 1592288 ||||| |||||||||||||||||||||||| |||||||||||||| | |||||||| | Sbjct 1147 GCAAGCAGGTGGCCAACATGATCAAGGGCAAGACGCCCGAGGAGATCAGGAAGACCTTCA 1206 Query 1592289 ACATCAAGT 1592297 | ||||||| Sbjct 1207 ATATCAAGT 1215 >seq254839 Length=115048 Score = 116 bits (128), Expect = 5e-20 Identities = 152/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTC---GCGCGTGC 1254399 || ||||||| ||||| ||| | ||| | ||| | ||||||||||| || |||| Sbjct 19195 GCTTGGCCAGCTCGCCCGGCAGCAACAGCCTTACGCCCGTCTGGATCTCTCTGCTCGTGA 19254 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 ||| || |||||| ||||||| || || | ||||||| | |||| || |||| Sbjct 19255 TAGTCGATTT---CTTGTTGTAGTGCGCAAGCCGACTGGCCTCGCTCGCGATCCGCTCGA 19311 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 || ||||| ||||| |||||||| ||||| | |||| ||||||||| ||||| Sbjct 19312 ACACATCGTTCACAAAGCTGTTCATGATGGACATGGCCTTGCCCGAGATGCCCGTGTCGG 19371 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | ||||||||||||| Sbjct 19372 GGTGCACCTGGCGCAACACCTTGTAGATG 19400 >seq217143 Length=7797 Score = 89.7 bits (98), Expect = 6e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 507710 CGATTCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAAC 507769 ||| |||||||| |||||||| | |||||||||||||||| ||||| ||||||||||| Sbjct 2973 CGACTCAACCTGTCCGTCACGAGTCCCTACAACGCCGACTTCGACGGGGACGAGATGAAT 2914 Query 507770 CTGCACGTGCCCCAGTC 507786 ||||| |||| ||||| Sbjct 2913 CTGCATTTGCCGCAGTC 2897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6086191861405518