Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq254839 138 2e-26 seq145165 129 9e-24 seq145164 129 9e-24 seq14906 129 9e-24 seq223181 96.9 5e-14 seq204189 96.9 5e-14 seq217143 93.3 7e-13 seq144215 87.8 3e-11 >seq254839 Length=115048 Score = 138 bits (152), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || |||||| ||||||| ||||| ||| Sbjct 19156 TGTACTTGGTGACCGCCTTGGTGCCCTCGCTCACCGCGTGCTTGGCCAGCTCGCCCGGCA 19215 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||| | ||||||||||| | | | ||| || |||||| | Sbjct 19216 GCAACAGCCTTACGCCCGTCTGGATCTCTCTGCTCGTGATAGTCGATTTCTTGTTGTAGT 19275 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| || || | ||||||| | |||| || |||| || ||||| ||||| ||||| Sbjct 19276 GCGCAAGCCGACTGGCCTCGCTCGCGATCCGCTCGAACACATCGTTCACAAAGCTGTTCA 19335 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | ||| ||||||||| ||||||||||||||| | |||||||| Sbjct 19336 TGATGGACATGGCCTTGCCCGAGATGCCCGTGTCGGGGTGCACCTGGCGCAACACCTTGT 19395 Query 1485710 A 1485710 | Sbjct 19396 A 19396 >seq145165 Length=2190 Score = 129 bits (142), Expect = 9e-24 Identities = 143/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 2035572 CGCACCGACGACATTTCGCCGTGGGACAAGGCCTTT-TGCGAGGTCGACCAACCCACCCT 2035630 ||||| ||||||||| | |||||| || || |||||| | ||||| ||| || Sbjct 1878 CGCACGGACGACATTCCCAGCTGGGACCTGGAGTTCCTGCGAG-TGGACCAGGGCACGCT 1936 Query 2035631 CTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTG 2035690 || ||| | ||| | |||||||||||||| ||||||||| || || || || | || Sbjct 1937 GTTCGAGCTCATCATGGCCGCCAACTACCTGGACATCAAGGGGCTGCTGGACGTGTGCTG 1996 Query 2035691 CAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAA 2035750 |||| ||||||||| | |||||||||||| |||||||||| ||| | |||||||| || Sbjct 1997 CAAGCAGGTGGCCAACATGATCAAGGGCAAGACGCCCGAGGAGATCAGGAAGACCTTCAA 2056 Query 2035751 CATCAAGT 2035758 ||||||| Sbjct 2057 TATCAAGT 2064 >seq145164 Length=2234 Score = 129 bits (142), Expect = 9e-24 Identities = 143/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 2035572 CGCACCGACGACATTTCGCCGTGGGACAAGGCCTTT-TGCGAGGTCGACCAACCCACCCT 2035630 ||||| ||||||||| | |||||| || || |||||| | ||||| ||| || Sbjct 1922 CGCACGGACGACATTCCCAGCTGGGACCTGGAGTTCCTGCGAG-TGGACCAGGGCACGCT 1980 Query 2035631 CTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTG 2035690 || ||| | ||| | |||||||||||||| ||||||||| || || || || | || Sbjct 1981 GTTCGAGCTCATCATGGCCGCCAACTACCTGGACATCAAGGGGCTGCTGGACGTGTGCTG 2040 Query 2035691 CAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAA 2035750 |||| ||||||||| | |||||||||||| |||||||||| ||| | |||||||| || Sbjct 2041 CAAGCAGGTGGCCAACATGATCAAGGGCAAGACGCCCGAGGAGATCAGGAAGACCTTCAA 2100 Query 2035751 CATCAAGT 2035758 ||||||| Sbjct 2101 TATCAAGT 2108 >seq14906 Length=5425 Score = 129 bits (142), Expect = 9e-24 Identities = 143/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 2035572 CGCACCGACGACATTTCGCCGTGGGACAAGGCCTTT-TGCGAGGTCGACCAACCCACCCT 2035630 ||||| ||||||||| | |||||| || || |||||| | ||||| ||| || Sbjct 1029 CGCACGGACGACATTCCCAGCTGGGACCTGGAGTTCCTGCGAG-TGGACCAGGGCACGCT 1087 Query 2035631 CTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTG 2035690 || ||| | ||| | |||||||||||||| ||||||||| || || || || | || Sbjct 1088 GTTCGAGCTCATCATGGCCGCCAACTACCTGGACATCAAGGGGCTGCTGGACGTGTGCTG 1147 Query 2035691 CAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAA 2035750 |||| ||||||||| | |||||||||||| |||||||||| ||| | |||||||| || Sbjct 1148 CAAGCAGGTGGCCAACATGATCAAGGGCAAGACGCCCGAGGAGATCAGGAAGACCTTCAA 1207 Query 2035751 CATCAAGT 2035758 ||||||| Sbjct 1208 TATCAAGT 1215 >seq223181 Length=34313 Score = 96.9 bits (106), Expect = 5e-14 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| || || |||||||| ||||| || |||||| |||||| || || ||| Sbjct 18417 TGTACTTCGTCACCGCCTTGGTTCCCTCGCTCACAGCGTGCTTGGCCAACTCTCCCGGCA 18476 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||| | ||||||||||| | | | |||||| |||||| Sbjct 18477 ACAGCAGTCTCACACCCGTCTGGATCTCTCTGCTCGTGATCGTCGACTTCTTGTTGTAAT 18536 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| || | ||||| || | ||||| |||| || || || || || ||||| Sbjct 18537 GTGCCAAACGACTTGCCTCACTGGCAATGCGCTCGAACACATCATTCACGAAGCTGTTCA 18596 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| | |||| |||||||| ||| || || |||||| ||||| |||| Sbjct 18597 TGATCGACATAGCTTTGCCAGAGATGCCAGTGTCAGGATGAACCTGCCGAAGCACTTTGT 18656 Query 1485710 A 1485710 | Sbjct 18657 A 18657 >seq204189 Length=23258 Score = 96.9 bits (106), Expect = 5e-14 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| || || |||||||| ||||| || |||||| |||||| || || ||| Sbjct 12080 TGTACTTCGTCACTGCCTTGGTTCCCTCGCTCACAGCGTGCTTGGCCAACTCTCCCGGCA 12139 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||| ||||||||||||| | | | |||||| |||||| Sbjct 12140 ACAGCAGTCTCACACCGGTCTGGATCTCTCTGCTCGTGATCGTCGACTTCTTGTTGTAAT 12199 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| || | ||||| | | ||||| |||| || || || || || ||||| Sbjct 12200 GTGCCAAACGACTTGCCTCACTAGCAATGCGCTCGAACACATCATTAACGAAGCTGTTCA 12259 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | |||||||| | |||| ||||||||| ||| || || |||||| ||||| |||| Sbjct 12260 TAATCGACATAGCTTTGCCGGAGATGCCAGTGTCAGGATGAACCTGCCGAAGCACTTTGT 12319 Query 1485710 A 1485710 | Sbjct 12320 A 12320 >seq217143 Length=7797 Score = 93.3 bits (102), Expect = 7e-13 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692 || ||||| ||||||||| |||| ||| | |||||||||||||||| ||||| |||||| Sbjct 2979 ACATTCCGACTCAACCTGTCCGTCACGAGTCCCTACAACGCCGACTTCGACGGGGACGAG 2920 Query 429693 ATGAACCTGCACGTGCCCCAGTCG 429716 ||||| ||||| |||| |||||| Sbjct 2919 ATGAATCTGCATTTGCCGCAGTCG 2896 >seq144215 Length=3719 Score = 87.8 bits (96), Expect = 3e-11 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| || || |||||||| ||||| || |||||| |||||| || || || Sbjct 3073 TGTACTTCGTCACCGCCTTGGTTCCCTCGCTCACAGCGTGCTTGGCCAACTCTCCCGGCT 3132 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||| | ||||||||||| | | | |||||| ||||||| Sbjct 3133 ACAGCAGTCTCACTCCCGTCTGGATCTCTCTGCTCGTGATCGTCGACTTCTTGTTATAAT 3192 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || | || | ||||| | | ||||| |||| || || || || || ||||| Sbjct 3193 GTGCTAAACGACTTGCCTCACTAGCAATGCGCTCGAACACATCATTCACGAAGCTGTTCA 3252 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| | |||| |||||||| ||| || || |||||| ||||| |||| Sbjct 3253 TGATCGACATAGCTTTGCCAGAGATGCCAGTGTCAGGATGAACCTGCCGAAGCACTTTGT 3312 Query 1485710 A 1485710 | Sbjct 3313 A 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7889093867806506