Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq171550 100 4e-16 >seq171550 Length=2561 Score = 100 bits (110), Expect = 4e-16 Identities = 268/406 (66%), Gaps = 54/406 (13%) Strand=Plus/Plus Query 84292 ATGAATTAACATGATACTTTGGTACCGTCTAGTCGGCTTATATGTCGGGCTAATGGTCTT 84351 |||||| ||||| |||| |||||||| ||||||||| ||| ||||| || || | Sbjct 1169 ATGAATAAACATCCTACTGTGGTACCGCCTAGTCGGCGTAT-TGTCG---TACTGCT--- 1221 Query 84352 TTTGATCATC----------AAGTGGCTATAAGTGGTACGTCAACGACAGTTGACACCTA 84401 ||||| || | ||||||| ||| ||||||||| | ||||| | ||||||| Sbjct 1222 TTTGAACAACGACGCGGAGTAAGTGGCAATACGTGGTACGTAACTGACAGGTTACACCTA 1281 Query 84402 GTGGTTTAATTAAAGTGAATCTTTAATTAACCGGAACAGGCAAGGTTGATGAAAACGGTC 84461 | |||| | || || |||||||| ||| | ||||||||||| Sbjct 1282 GCCCTTTATCGGA--------TTGGGTT-----GAACAGGCGAGGCCGGTGAAAACGGTC 1328 Query 84462 AAAATT--CAGGTGGTTT---AAGGGGACTACGTGGATGAGACCGTCGGTGTAGCTTAAA 84516 ||| || || | |||| |||| | | | |||| ||||||||||| | | || Sbjct 1329 AAAGTTTCCATGCCGTTTGCAAAGGCGGAT--GGGGATCAGACCGTCGGTTCTGTTATAA 1386 Query 84517 GGTAACTTTAAGTGAGATCGCTATCGACTGGGTCATCAACCGGTTGTCCTAGTTTTCAAG 84576 || || | || | |||||||||||||||||| ||||| | | | ||| Sbjct 1387 AGTGACAT--AGCAGGGTCGCTATCGACTGGGTCA----CCGGTCGGTCAAACA---AAG 1437 Query 84577 CTAGGATGGCTCAATGTACAGTCAGGCCATCATA--------AGGATTATTTATTCCGAG 84628 | | |||||||||||||||||||||||| ||| | | |||| | | ||| Sbjct 1438 TTCGTTTGGCTCAATGTACAGTCAGGCCATGATAACCCGTTTAAGGTTATGAACTGAGAG 1497 Query 84629 TGATGCTTATGTGATTAAGCAGATTAAAAATTGATGCTTAGGAAGC 84674 | |||||| ||||| | | |||| |||||||| | | |||||| Sbjct 1498 TCATGCTTCAGTGATCAGGTTGATTGAAAATTGAGACCTGGGAAGC 1543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 653189214486000